Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01037 and BL00849

See DNA alignment / Visit BSNT_01037 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence pep-align/BSNT_01037___ydiF.1.5803.seq
#    -bsequence pep-align/BL00849___ydiF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01037___ydiF-BL00849___ydiF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01037___ydiF-BL00849___ydiF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01037___ydiF
# 2: BL00849___ydiF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 642
# Identity:     512/642 (79.8%)
# Similarity:   581/642 (90.5%)
# Gaps:           1/642 ( 0.2%)
# Score: 2673.0
# 
#
#=======================================

BSNT_01037___      1 MMILQINQLSKSFGADTILNNIKLEVRNRDRIAIVGRNGAGKSTLLKIIA     50
                     |||||:|||||||||||||.|||||||:|||||:||||||||||||||||
BL00849___ydi      1 MMILQVNQLSKSFGADTILTNIKLEVRSRDRIAVVGRNGAGKSTLLKIIA     50

BSNT_01037___     51 GQLSYEKGEIIKPKDITMGYLAQHTGLDSKLTIKEELLTVFDHLKAMEKE    100
                     |:||||||:||||||:|||||.||:|||||||:|||||:|||.||.||||
BL00849___ydi     51 GKLSYEKGDIIKPKDLTMGYLDQHSGLDSKLTLKEELLSVFDFLKKMEKE    100

BSNT_01037___    101 MRAMEEKMAAAAPGELESIMKTYDRLQQEFKDKGGYQYEADVRSVLHGLG    150
                     |||:|||||.|.|.:|||:|||||||||||||||||||||:||||:||||
BL00849___ydi    101 MRAIEEKMAQAGPDKLESLMKTYDRLQQEFKDKGGYQYEAEVRSVMHGLG    150

BSNT_01037___    151 FSHFDDSTQVQSLSGGQKTRLALGKLLLTQPDLLILDEPTNHLDIDTLTW    200
                     |:.||||.:||.|||||||||||||:|||:||||||||||||||||||||
BL00849___ydi    151 FAGFDDSVRVQDLSGGQKTRLALGKMLLTKPDLLILDEPTNHLDIDTLTW    200

BSNT_01037___    201 LEHFLQGYSGAILIVSHDRYFLDKVVNQVYEVSRAESKKYHGNYSAYLDQ    250
                     ||.:||.|||||||||||||||||||.||||::|::||||.||||:||..
BL00849___ydi    201 LEQYLQSYSGAILIVSHDRYFLDKVVTQVYEITRSQSKKYIGNYSSYLQL    250

BSNT_01037___    251 KAAQYEKDLKMYEKQQDEIAKLQDFVDRNLARASTTKRAQSRRKQLERME    300
                     ||.|.|::.|:|||||||||||||||||||||||||||||||||||||||
BL00849___ydi    251 KAEQLERETKLYEKQQDEIAKLQDFVDRNLARASTTKRAQSRRKQLERME    300

BSNT_01037___    301 VMSKPLGDEKSANFHFDITKQSGNEVLRVHDLTISYENQPPLLTEVSFML    350
                     :|.|||||||||:|.|:||:||||:||||.|||:||::|||||..:.|.:
BL00849___ydi    301 IMDKPLGDEKSASFRFEITRQSGNDVLRVEDLTVSYQDQPPLLRSLDFRI    350

BSNT_01037___    351 TRGESAALVGPNGIGKSTLLKTLIDTLKPDQGTISYGSNVSVGYYDQEQA    400
                     |||||.|||||||||||||||.||..|:|..|||:.||:||:||||||||
BL00849___ydi    351 TRGESVALVGPNGIGKSTLLKALIQKLQPVSGTIATGSHVSIGYYDQEQA    400

BSNT_01037___    401 ELTSSKRVLDELWDEYPGLPEKEIRTCLGNFLFSGDDVLKPVHSLSGGEK    450
                     ||||||||||||||:||.:.||:||||||||||||:|||||||:||||||
BL00849___ydi    401 ELTSSKRVLDELWDDYPEMNEKDIRTCLGNFLFSGEDVLKPVHALSGGEK    450

BSNT_01037___    451 ARLALAKLMLQKANFLILDEPTNHLDLDSKEVLENALIDYPGTLLFVSHD    500
                     |||||||||||||||||||||||||||||||||||||||||||:||||||
BL00849___ydi    451 ARLALAKLMLQKANFLILDEPTNHLDLDSKEVLENALIDYPGTILFVSHD    500

BSNT_01037___    501 RYFINRIATRVLELSSSHIEEYLGDYDYYTEKKTEQLELEKINQQEETEK    550
                     |||||||||:|||||....||||||||||||||.:||||:::.:|.|..:
BL00849___ydi    501 RYFINRIATKVLELSRDKAEEYLGDYDYYTEKKAQQLELKELEKQTEERQ    550

BSNT_01037___    551 TPATVKSDSKRSYEEEKEWKKKERQRLRRIEEIETTVQTIEENISRNDEL    600
                     ..|:.|..:|:|||||||.|:|||||.||||:|||.:..|||.|.:|:||
BL00849___ydi    551 KAASEKPGAKKSYEEEKELKRKERQRQRRIEDIETRITAIEEQIEKNEEL    600

BSNT_01037___    601 LCDPEVYQDHEKVQAIHADNEKLNQELESLLSEWEELSTEED    642
                     ||:|:|:|||||||.||::||:||:|||.||||||.|||.| 
BL00849___ydi    601 LCNPDVFQDHEKVQEIHSENEQLNEELEQLLSEWETLSTNE-    641


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