Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01040 and BL00847
See
DNA alignment /
Visit
BSNT_01040 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:33
# Commandline: needle
# -asequence pep-align/BSNT_01040___rex.1.5803.seq
# -bsequence pep-align/BL00847___rex.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01040___rex-BL00847___rex.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01040___rex-BL00847___rex.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01040___rex
# 2: BL00847___rex
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity: 192/217 (88.5%)
# Similarity: 202/217 (93.1%)
# Gaps: 4/217 ( 1.8%)
# Score: 970.5
#
#
#=======================================
BSNT_01040___ 1 MNKDQSKIPQATAKRLPLYYRFLKNLHASGKQRVSSAELSDAVKVDSATI 50
||.|.|||||||||||||||||||||||||||||||||||||||||||||
BL00847___rex 1 MNMDHSKIPQATAKRLPLYYRFLKNLHASGKQRVSSAELSDAVKVDSATI 50
BSNT_01040___ 51 RRDFSYFGALGKKGYGYNVDYLLSFFRKTLDQDEMTDVILIGVGNLGTAF 100
|||||||||||||||||||:||||||||||||||.|:|.|||||||||||
BL00847___rex 51 RRDFSYFGALGKKGYGYNVNYLLSFFRKTLDQDETTNVTLIGVGNLGTAF 100
BSNT_01040___ 101 LHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDES--V 148
|||||.|||||||:|||||||.||||||||||||:|:.||:|:.|:. |
BL00847___rex 101 LHYNFIKNNNTKIAMAFDINEEKIGTEVGGVPVYDLNKLEEHMTDDDIPV 150
BSNT_01040___ 149 AILTVPAVAAQSITDRLVALGIKGILNFTPARLNVPEHIRIHHIDLAVEL 198
|||||||.||||||||||||||||||||||||||||||||||||||||||
BL00847___rex 151 AILTVPAQAAQSITDRLVALGIKGILNFTPARLNVPEHIRIHHIDLAVEL 200
BSNT_01040___ 199 QSLVYFLKHYSVLEEIE 215
|||||||||||:.|:
BL00847___rex 201 QSLVYFLKHYSMQEK-- 215
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.