Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

Amino acid alignment: BSNT_01040 and BL00847

See DNA alignment / Visit BSNT_01040 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence pep-align/BSNT_01040___rex.1.5803.seq
#    -bsequence pep-align/BL00847___rex.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01040___rex-BL00847___rex.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01040___rex-BL00847___rex.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01040___rex
# 2: BL00847___rex
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 217
# Identity:     192/217 (88.5%)
# Similarity:   202/217 (93.1%)
# Gaps:           4/217 ( 1.8%)
# Score: 970.5
# 
#
#=======================================

BSNT_01040___      1 MNKDQSKIPQATAKRLPLYYRFLKNLHASGKQRVSSAELSDAVKVDSATI     50
                     ||.|.|||||||||||||||||||||||||||||||||||||||||||||
BL00847___rex      1 MNMDHSKIPQATAKRLPLYYRFLKNLHASGKQRVSSAELSDAVKVDSATI     50

BSNT_01040___     51 RRDFSYFGALGKKGYGYNVDYLLSFFRKTLDQDEMTDVILIGVGNLGTAF    100
                     |||||||||||||||||||:||||||||||||||.|:|.|||||||||||
BL00847___rex     51 RRDFSYFGALGKKGYGYNVNYLLSFFRKTLDQDETTNVTLIGVGNLGTAF    100

BSNT_01040___    101 LHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDES--V    148
                     |||||.|||||||:|||||||.||||||||||||:|:.||:|:.|:.  |
BL00847___rex    101 LHYNFIKNNNTKIAMAFDINEEKIGTEVGGVPVYDLNKLEEHMTDDDIPV    150

BSNT_01040___    149 AILTVPAVAAQSITDRLVALGIKGILNFTPARLNVPEHIRIHHIDLAVEL    198
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BL00847___rex    151 AILTVPAQAAQSITDRLVALGIKGILNFTPARLNVPEHIRIHHIDLAVEL    200

BSNT_01040___    199 QSLVYFLKHYSVLEEIE    215
                     |||||||||||:.|:  
BL00847___rex    201 QSLVYFLKHYSMQEK--    215


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.