Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01040 and BL00847
See
Amino acid alignment /
Visit
BSNT_01040 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:33
# Commandline: needle
# -asequence dna-align/BSNT_01040___rex.1.5803.seq
# -bsequence dna-align/BL00847___rex.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01040___rex-BL00847___rex.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01040___rex-BL00847___rex.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01040___rex
# 2: BL00847___rex
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 657
# Identity: 518/657 (78.8%)
# Similarity: 518/657 (78.8%)
# Gaps: 18/657 ( 2.7%)
# Score: 2011.5
#
#
#=======================================
BSNT_01040___ 1 ATGAATAAGGATCAATCAAAAATTCCGCAGGCGACGGCGAAACGGCTGCC 50
|||||.|.||||||.||||||||||||||.|||||.||||||||||||||
BL00847___rex 1 ATGAACATGGATCATTCAAAAATTCCGCAAGCGACAGCGAAACGGCTGCC 50
BSNT_01040___ 51 GCTTTACTATCGCTTTTTAAAGAATCTTCATGCGTCAGGAAAACAGCGTG 100
..|.||.|||||.||||||||.||.||||||||.||.||.||||||||||
BL00847___rex 51 ATTATATTATCGTTTTTTAAAAAACCTTCATGCATCCGGGAAACAGCGTG 100
BSNT_01040___ 101 TATCATCCGCTGAACTTAGTGATGCCGTAAAGGTTGATTCTGCCACGATT 150
||||.||||||||.||.||.||||||||.||.||.|||||.||.||.||.
BL00847___rex 101 TATCTTCCGCTGAGCTGAGCGATGCCGTCAAAGTCGATTCCGCGACCATC 150
BSNT_01040___ 151 CGGAGGGATTTTTCCTATTTTGGAGCTCTTGGCAAAAAAGGATACGGATA 200
||.||||||||.||.||.||.||.||.||.||.||||||||||||||.||
BL00847___rex 151 CGAAGGGATTTCTCGTACTTCGGCGCGCTCGGGAAAAAAGGATACGGCTA 200
BSNT_01040___ 201 TAATGTGGATTATTTGCTGTCTTTTTTCCGAAAAACGCTTGATCAGGATG 250
.|||||..|||||||||||||.||||||.||||.||||||||||||||||
BL00847___rex 201 CAATGTCAATTATTTGCTGTCCTTTTTCAGAAAGACGCTTGATCAGGATG 250
BSNT_01040___ 251 AGATGACAGACGTCA-TCTTGATTGGTGTCGGGAACTTGGGAACGGCATT 299
|.|.|||..||||.| .||| |||||.||.|||||.|||||.||.||.||
BL00847___rex 251 AAACGACGAACGTAACGCTT-ATTGGCGTGGGGAATTTGGGGACAGCCTT 299
BSNT_01040___ 300 TCTTCACTATAATTTCACAAAAAACAATAACACAAAAATTTCTATGGCTT 349
|||.||.||.|||||.|..|||||||||||.||||||||..|.|||||.|
BL00847___rex 300 TCTCCATTACAATTTTATCAAAAACAATAATACAAAAATCGCCATGGCGT 349
BSNT_01040___ 350 TTGATATAAATGAGAG-TAAAATAGGAACTGAGGTAGGCGGCGTGCCCGT 398
||||.||.||||| || .|||||.|||||.|||||.||||||||.|||||
BL00847___rex 350 TTGACATCAATGA-AGAAAAAATCGGAACCGAGGTCGGCGGCGTTCCCGT 398
BSNT_01040___ 399 CTATAACCTTGATGACCTTGAACAACACGTAAAAGATGA----AT--CAG 442
||||.||||..||.|.||||||.|.||..|.|..||||| || |.|
BL00847___rex 399 CTATGACCTGAATAAGCTTGAAGAGCATATGACGGATGATGATATCCCGG 448
BSNT_01040___ 443 TTGCCATTCTTACAGTGCCAGCAGTTGCCGCTCAATCCATTACAGACAGA 492
|.||||||.|.||.||.|||||....|||||.||.||.|||||||||||.
BL00847___rex 449 TCGCCATTTTGACGGTTCCAGCTCAAGCCGCACAGTCGATTACAGACAGG 498
BSNT_01040___ 493 TTGGTCGCATTAGGAATCAAGGGAATCCTTAATTTTACGCCGGCCCGTTT 542
.||||.||..|.||.||.||.||.||.||||||||.||||||||.||.||
BL00847___rex 499 CTGGTGGCGCTTGGCATTAAAGGCATTCTTAATTTCACGCCGGCTCGCTT 548
BSNT_01040___ 543 GAATGTGCCGGAACACATTCGAATTCATCATATAGATTTAGCAGTTGAGC 592
|||||||||||||||||||||.|||||||||||||||||.|||||.||.|
BL00847___rex 549 GAATGTGCCGGAACACATTCGCATTCATCATATAGATTTGGCAGTGGAAC 598
BSNT_01040___ 593 TTCAGTCACTGGTTTATTTTTTGAAGCATTATTCAGTTTTAG-AGGAAAT 641
|||||||.|||||.||||||.||||.|||||||||.| | ||||||
BL00847___rex 599 TTCAGTCGCTGGTGTATTTTCTGAAACATTATTCAAT----GCAGGAAA- 643
BSNT_01040___ 642 CGAATAA 648
|.|||
BL00847___rex 644 --AGTAA 648
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.