Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04952 and BL00836
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:08
# Commandline: needle
# -asequence pep-align/BSNT_04952___yvrI.1.5803.seq
# -bsequence pep-align/BL00836___yvrI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04952___yvrI-BL00836___yvrI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04952___yvrI-BL00836___yvrI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04952___yvrI
# 2: BL00836___yvrI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 212
# Identity: 107/212 (50.5%)
# Similarity: 149/212 (70.3%)
# Gaps: 19/212 ( 9.0%)
# Score: 567.0
#
#
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BSNT_04952___ 1 MDYQSLLRSKCKEIMKHPIVKHFLSNPQHYRLFKNVMESPNEKDAKSLDE 50
|..|:|||:|.|||.:||:||||||||::.|||.:|:|.|:.::|:.||.
BL00836___yvr 1 MIDQTLLRAKIKEITRHPLVKHFLSNPRYERLFNHVLEHPDSEEAECLDR 50
BSNT_04952___ 51 LFKQFYKEIRIVKYMNSMIRIFSIDFDKRVRKNQKRYPLTVDHPEAGDRL 100
.||:|||:||::||:||||||||:|||||||||::|:||.:|. ...|
BL00836___yvr 51 EFKRFYKKIRMIKYINSMIRIFSVDFDKRVRKNRERFPLMIDD---SPNL 97
BSNT_04952___ 101 PSETGSDAFEEFLDRQDDLSQHVQDYQLYQAIQKLTDKQKSVLTKVYLHG 150
|.....|..::.|:::::||:|:||..||:|..:||||||.||.::|:||
BL00836___yvr 98 PEPPRGDLLDDVLEQEEELSEHLQDPMLYEAFLQLTDKQKKVLAQIYIHG 147
BSNT_04952___ 151 ATMQEIADSLGESRQNISNIHKKGLENIRKQLAAQKRGKSKLWTASLNKK 200
.:||||||||||||||||.|||:.||.||:.|.::..|.....:|.
BL00836___yvr 148 VSMQEIADSLGESRQNISKIHKRALEKIRELLNSKAEGNDNSESAR---- 193
BSNT_04952___ 201 RNKKTRLMTLSI 212
BL00836___yvr 193 ------------ 193
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