Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00416 and BL00834
See
DNA alignment /
Visit
BSNT_00416 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:03
# Commandline: needle
# -asequence pep-align/BSNT_00416___ybfQ.1.5803.seq
# -bsequence pep-align/BL00834___ybfQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00416___ybfQ-BL00834___ybfQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00416___ybfQ-BL00834___ybfQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00416___ybfQ
# 2: BL00834___ybfQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity: 246/322 (76.4%)
# Similarity: 287/322 (89.1%)
# Gaps: 0/322 ( 0.0%)
# Score: 1397.0
#
#
#=======================================
BSNT_00416___ 1 MEKQYRVLLYYKYVPIEDPEAFREQHLAFCKELGLLGRILVSSEGINGTV 50
|:.|||||||||||.|::||.|.|.||.|||:|||.|||||:.|||||||
BL00834___ybf 1 MKNQYRVLLYYKYVHIDNPEQFAEDHLKFCKDLGLKGRILVAGEGINGTV 50
BSNT_00416___ 51 SGTVEQTEKYMETMKADPRFADMVFKIDEAEGHAFKKIFVRHKKELVTLR 100
|||||||::||..||:||||.||||||||:|||||||:.|||:.||||||
BL00834___ybf 51 SGTVEQTDRYMSEMKSDPRFEDMVFKIDESEGHAFKKMHVRHRDELVTLR 100
BSNT_00416___ 101 LEDDVDPNETTGQHLKPAEFYEKMQDPNTIVIDARNDYEYDLGHFRGAVR 150
||||:||||.||::|:|.||||.||..:|||:||||||||||||||||:|
BL00834___ybf 101 LEDDIDPNELTGKYLEPKEFYEAMQQEDTIVVDARNDYEYDLGHFRGAIR 150
BSNT_00416___ 151 PDIEAFRELPEWIEEHKDMLEGKKILTYCTGGVRCEKFSGWLVKQGFEDV 200
|||:|||||||||.::|:.|||||||||||||:|||||||||.|:|||||
BL00834___ybf 151 PDIKAFRELPEWIRDNKEKLEGKKILTYCTGGIRCEKFSGWLKKEGFEDV 200
BSNT_00416___ 201 AQLDGGIVTYGKDPEVQGKLWDGQCYVFDERISVPVNRVEHVIVGKDYFT 250
:||.||||||||||||||:||||:|||||||||||||:.|||||||||||
BL00834___ybf 201 SQLHGGIVTYGKDPEVQGELWDGKCYVFDERISVPVNQKEHVIVGKDYFT 250
BSNT_00416___ 251 GEPCERYVNCANPSCNKKMICTPENEYKYMRSCSHECRTNPRNLYVKEHN 300
|||||||||||||.|||::||:.|||::|:|.|:||||.:|||||||||.
BL00834___ybf 251 GEPCERYVNCANPECNKQIICSEENEHRYLRGCTHECRVHPRNLYVKEHG 300
BSNT_00416___ 301 MTEEEVNARLAAIETEDHAAAE 322
::||||..||..::.|:|||..
BL00834___ybf 301 LSEEEVQERLEKLKEEEHAAQS 322
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.