Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00416 and BL00834
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:03
# Commandline: needle
# -asequence dna-align/BSNT_00416___ybfQ.1.5803.seq
# -bsequence dna-align/BL00834___ybfQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00416___ybfQ-BL00834___ybfQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00416___ybfQ-BL00834___ybfQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00416___ybfQ
# 2: BL00834___ybfQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1002
# Identity: 709/1002 (70.8%)
# Similarity: 709/1002 (70.8%)
# Gaps: 66/1002 ( 6.6%)
# Score: 2395.0
#
#
#=======================================
BSNT_00416___ 1 ATGGAAAAACAATACAGAGTATTACTTTACTATAAATATGTTCCGATTGA 50
|||.|.||.||||||.|||||||..|.||.|||||||||||||..||.||
BL00834___ybf 1 ATGAAGAATCAATACCGAGTATTGTTGTATTATAAATATGTTCATATCGA 50
BSNT_00416___ 51 AGATCCAGAGGCGTTTAG----AGAGCAGCATCTGGCTTTTTGTAAGGAG 96
..|.||.|| ||..||.| |||.|| |.||..| ||.||.||.||.
BL00834___ybf 51 TAACCCTGA-GCAATTTGCCGAAGATCA-CCTCAAG--TTCTGCAAAGAT 96
BSNT_00416___ 97 CTTGGTTTGTTAGGCCGTATCCTTGTTTCTTCTGAAGGAATTAACGGTAC 146
.|.||..||...||.||.||||||||..|...|||||||||.|||||.||
BL00834___ybf 97 TTGGGGCTGAAGGGGCGCATCCTTGTGGCGGGTGAAGGAATAAACGGAAC 146
BSNT_00416___ 147 GGTATCAGGTACGGTTGAACAGACTGAAAAATATATG---GAAACAATG- 192
.||.|||||.||.||.||.|||||.||....|||||| || ||||
BL00834___ybf 147 CGTGTCAGGAACCGTAGAGCAGACAGACCGCTATATGAGTGA---AATGA 193
BSNT_00416___ 193 AAAGCTGATCCTCGCTTTGCGGACATGGTATTTAAAATTGATGAAGCAGA 242
||||| |||||.|||||||..|||||||||||||||||.||||||.||||
BL00834___ybf 194 AAAGC-GATCCCCGCTTTGAAGACATGGTATTTAAAATCGATGAATCAGA 242
BSNT_00416___ 243 AGGCCATGCCTTCAAAAAAAT-CTTCGTCCGCCATAAAAAAGAGCTTGTA 291
|||.||.||.||||||||||| |.| |||||||||....|.|||||.||.
BL00834___ybf 243 AGGGCACGCTTTCAAAAAAATGCAT-GTCCGCCATCGCGATGAGCTGGTG 291
BSNT_00416___ 292 ACGCTTCGTCTTGAAGATGATGTCGATCCGAACGAAACAACAGGCCAGCA 341
|||||.||.||.|||||||||.||||||||||||||..||||||..|..|
BL00834___ybf 292 ACGCTCCGCCTGGAAGATGATATCGATCCGAACGAATTAACAGGAAAATA 341
BSNT_00416___ 342 TTTGAAGCCTGCAGAATTTTATGAGAAGATGCAGGATCCAAACACAATTG 391
..||.||||...|||||||||||||..|||||||.|...|.|.||.||||
BL00834___ybf 342 CCTGGAGCCAAAAGAATTTTATGAGGCGATGCAGCAGGAAGATACGATTG 391
BSNT_00416___ 392 TCATCGACGCGCGTAACGATTACGAGTATGACCTTGGCCATTTCAGAGGT 441
||.|||||||.||.|||||.||.|||||.||..|.||.||||||.|.||.
BL00834___ybf 392 TCGTCGACGCACGGAACGACTATGAGTACGATTTGGGGCATTTCCGCGGA 441
BSNT_00416___ 442 GCGGTCCGTCCTGACATCGAAGCCTTCCGTGAATTACCTGAATGGATTGA 491
|||.||.|.||.|||||..||||.|||||.|||||||||||.|||||...
BL00834___ybf 442 GCGATCAGACCGGACATTAAAGCGTTCCGCGAATTACCTGAGTGGATCCG 491
BSNT_00416___ 492 AGAGCACAAAGATATGCTTGAAGGCAAAAAGATTTTAACGTACTGTACAG 541
.||..|||||||.|.|||.||||||||.||.||.||.||.|||||.||.|
BL00834___ybf 492 CGATAACAAAGAAAAGCTCGAAGGCAAGAAAATATTGACTTACTGCACGG 541
BSNT_00416___ 542 GCGGCGTGCGCTGTGAAAAGTTCTCAGGATGGCTGGTGAAGCAAGGCTTT 591
||||..|.|||||.|||||.||.||||||||||||...||..||||.|||
BL00834___ybf 542 GCGGAATCCGCTGCGAAAAATTTTCAGGATGGCTGAAAAAAGAAGGATTT 591
BSNT_00416___ 592 GAAGATGTAGCTCAGCTTGATGGCGGAATCGTGACATACGGAAAAGATCC 641
|||||.||..|.||||||.|.|||||.||.||.||.|||||||||||.||
BL00834___ybf 592 GAAGACGTGTCCCAGCTTCACGGCGGTATTGTAACGTACGGAAAAGACCC 641
BSNT_00416___ 642 AGAGGTGCAAGGCAAGCTTTGGGACGGCCAGTGCTACGTATTTGATGAAA 691
.||.||.|||||..|.||.||||||||..|.|||||.||.||.|||||||
BL00834___ybf 642 TGAAGTTCAAGGTGAACTGTGGGACGGGAAATGCTATGTTTTCGATGAAA 691
BSNT_00416___ 692 GAATCAGCGTGCCTGTCAACCGTGTC-----GAGCATGTGATTGTCGGCA 736
||||||||||.||.||||| || |||||.||.||||||||.|
BL00834___ybf 692 GAATCAGCGTTCCGGTCAA-----TCAGAAAGAGCACGTCATTGTCGGAA 736
BSNT_00416___ 737 AGGACTACTTTACAGGAGAACCGTGTGAGCGTTATGTGAACTGCGCAAAT 786
|.||.||.||.||.||.||.||.||.|||||.|||||.|||||||||||.
BL00834___ybf 737 AAGATTATTTCACCGGCGAGCCTTGCGAGCGCTATGTCAACTGCGCAAAC 786
BSNT_00416___ 787 CCATCTTGCAATAAAAAAATGATATGCACACCGGAAAATGAGTATAAATA 836
||....|||||.||..|.||.||.|||.|....|||||||||.|....||
BL00834___ybf 787 CCGGAATGCAACAAGCAGATCATCTGCTCTGAAGAAAATGAGCACCGCTA 836
BSNT_00416___ 837 TATGCGCAGCTGCAGCCACGAATGCCG----CACGAACCCAAGAAACCTG 882
|.||||..||||||..|||||.||||| | |.||..|.||||||
BL00834___ybf 837 TTTGCGGGGCTGCACGCACGAGTGCCGGGTTC----ATCCGCGCAACCTG 882
BSNT_00416___ 883 TATGTGAAAGAGCA-------TAATATGACAGAAGAAGAAGTAAACGCAA 925
|||||.|||||||| | ||||||||||.|| ||||
BL00834___ybf 883 TATGTCAAAGAGCACGGCCTTT-------CAGAAGAAGAGGT----GCAA 921
BSNT_00416___ 926 GACTGGC------AGCGATTGAAA-CAGAAGATCACGCTGCTGCTG-AAT 967
||..|.| ||| ||||| .|||.||.||.||.|| ||.| .||
BL00834___ybf 922 GAGAGACTCGAAAAGC---TGAAAGAAGAGGAACATGCAGC-GCAGTCAT 967
BSNT_00416___ 968 AA 969
||
BL00834___ybf 968 AA 969
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