Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04957 and BL00822

See DNA alignment / Visit BSNT_04957 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:08
# Commandline: needle
#    -asequence pep-align/BSNT_04957___yvrL.1.5803.seq
#    -bsequence pep-align/BL00822___yvrL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04957___yvrL-BL00822___yvrL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04957___yvrL-BL00822___yvrL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04957___yvrL
# 2: BL00822___yvrL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 134
# Identity:      34/134 (25.4%)
# Similarity:    60/134 (44.8%)
# Gaps:          25/134 (18.7%)
# Score: 166.5
# 
#
#=======================================

BSNT_04957___      1 ---------------MTYFAVIYILFSLAGTSYRSAAHVLLFAVVFLVLG     35
                                    ..:|..|.|||.|:|..|::...:|||.:.:..|.
BL00822___yvr      1 MKHFIICCISVIFVFFAHFLGISILFHLSGAFYQTVGSLLLFTLCYTGLT     50

BSNT_04957___     36 LCFEPFERLMIHSFTFFKTGKRLFILLAGIVQLLFLWMTAHTTDQLISDI     85
                     ...||.|:::|||.......:|:.:..|.::.:..||...:|.|:|:.|:
BL00822___yvr     51 FVLEPAEKVLIHSMKLLGINRRITVFAAEMITIGCLWAAIYTADELLDDV    100

BSNT_04957___     86 WLSTTEEMIVAAVFLILDKCNSALPS--------    111
                     .|:|:.|:::|..|..:||.  ..|.        
BL00822___yvr    101 LLTTSAEIMIAVSFFTIDKI--LYPRQRSGSLLY    132


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