Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04954 and BL00820

See DNA alignment / Visit BSNT_04954 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:08
# Commandline: needle
#    -asequence pep-align/BSNT_04954.1.5803.seq
#    -bsequence pep-align/BL00820.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04954-BL00820.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04954-BL00820.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04954
# 2: BL00820
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 50
# Identity:      31/50 (62.0%)
# Similarity:    38/50 (76.0%)
# Gaps:           1/50 ( 2.0%)
# Score: 160.0
# 
#
#=======================================

BSNT_04954         1 MDQVFIEEVVKQIGNLGFPALIAMYLLTRFEKKFDQLIELMTELKDHAKK     50
                     ||..||||..|||||:||||::|:|||||||||.|:||||:.|..:... 
BL00820            1 MDSAFIEEAAKQIGNVGFPAVLAIYLLTRFEKKIDELIELIKEKNETDD-     49


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