Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04954 and BL00820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:08
# Commandline: needle
# -asequence dna-align/BSNT_04954.1.5803.seq
# -bsequence dna-align/BL00820.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04954-BL00820.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04954-BL00820.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04954
# 2: BL00820
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 162
# Identity: 107/162 (66.0%)
# Similarity: 107/162 (66.0%)
# Gaps: 21/162 (13.0%)
# Score: 326.5
#
#
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BSNT_04954 1 ATGGATCAG-GTTTTTATAGAGGAAGTCGTAAAACAGATCGGCAATTTGG 49
||||| ||| |..||.||.|||||||..|..|||||.|||||||||.|.|
BL00820 1 ATGGA-CAGCGCATTCATTGAGGAAGCAGCGAAACAAATCGGCAATGTCG 49
BSNT_04954 50 GGTTTCCCGCGCTG-ATT-GCAATGTATCTGCTGACCCGATTCGAAAAGA 97
|.||||| .|||| ||| |||||.||..||||.||.||.||.|||||||
BL00820 50 GCTTTCC--AGCTGTATTGGCAATTTACTTGCTCACTCGTTTTGAAAAGA 97
BSNT_04954 98 AGTTTGATCAACTAATAGAACT----AATGACAGAACTGAAA--GATCAT 141
|..|.|||.||||.||.||.|| ||.||.|.||.||||| |||.||
BL00820 98 AAATCGATGAACTGATCGAGCTGATCAAAGAAAAAAATGAAACCGATGAT 147
BSNT_04954 142 GCAAAAAAATAA 153
..|
BL00820 148 TGA--------- 150
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