Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05005 and BL00819
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:12
# Commandline: needle
# -asequence pep-align/BSNT_05005___yvaA.1.5803.seq
# -bsequence pep-align/BL00819___yvaA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05005___yvaA-BL00819___yvaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05005___yvaA-BL00819___yvaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05005___yvaA
# 2: BL00819___yvaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 358
# Identity: 237/358 (66.2%)
# Similarity: 279/358 (77.9%)
# Gaps: 9/358 ( 2.5%)
# Score: 1264.0
#
#
#=======================================
BSNT_05005___ 1 MITLLKGRRKVDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTE 50
.||.::.|||||||||||||.|||.||::|:|.|:||||.|
BL00819___yva 1 ---------MVDKVRTGILGYGLSGSVFHAPLLSVLEDYEIRKVMTSRKE 41
BSNT_05005___ 51 EVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYEHAMACIQAGKHV 100
:||:|.|:||.|..:|:||.||.|:|||||||||||||.|..||:|||||
BL00819___yva 42 QVKQDLPEAEAVSTIEDITKDPDIDLVIVTTPSGLHYEMAKECIRAGKHV 91
BSNT_05005___ 101 VMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKLISEGS 150
|:||||||||||.|.|..||.||||||||||||||||||||||:||.||.
BL00819___yva 92 VLEKPMTATAEEAEELINAAKEKGVLLSVYHNRRWDNDFLTIKQLIKEGR 141
BSNT_05005___ 151 LEDINTYQVSYDRYRPEVQARWREKEGIATGTLYDLGSHIIDQTLHLFGM 200
|.::||:..||||:||.|:.||||::|..:|.|||||||:|||.||||||
BL00819___yva 142 LGEVNTFHASYDRFRPNVRQRWREQKGPGSGALYDLGSHLIDQALHLFGM 191
BSNT_05005___ 201 PKAVTANVMAQRENAETVDYFHLTLDYGKLQAILYGGSIVPANGPRYQIH 250
|..|||.|.|||.||||.||||:.|.|.:.|.||:.||||||||||||||
BL00819___yva 192 PNGVTAQVTAQRANAETDDYFHVILHYDQRQVILHSGSIVPANGPRYQIH 241
BSNT_05005___ 251 GKDSSFIKYGIDGQEDALRAGRKPEDDSWGADDPEFYGQLTTIRGSGKKT 300
|...|||||||||||||||||.||..|.||||.||:||:|.|:.|...:.
BL00819___yva 242 GSKGSFIKYGIDGQEDALRAGHKPAGDEWGADQPEYYGELATVEGDEIRK 291
BSNT_05005___ 301 ETIPSVNGSYLTYYRKIAESIREGAALPVTAEEGINVIRIIEAAMKSSKE 350
||:.::.|||||||:::|.||.||.:||||||||.:||||||||.|||:.
BL00819___yva 292 ETVETLPGSYLTYYKQLASSILEGGSLPVTAEEGRDVIRIIEAAQKSSET 341
BSNT_05005___ 351 KRTIMLEH 358
.:|:.|..
BL00819___yva 342 NQTVFLNK 349
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