Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04589 and BL00812

See DNA alignment / Visit BSNT_04589 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:44
# Commandline: needle
#    -asequence pep-align/BSNT_04589___yulC.1.5803.seq
#    -bsequence pep-align/BL00812___yulC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04589___yulC-BL00812___yulC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04589___yulC-BL00812___yulC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04589___yulC
# 2: BL00812___yulC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 494
# Identity:     194/494 (39.3%)
# Similarity:   285/494 (57.7%)
# Gaps:          10/494 ( 2.0%)
# Score: 912.0
# 
#
#=======================================

BSNT_04589___      1 MIYTAIDIGASSGRIMVGELNEGKLDIQEIHRFANGFSQRDGHCFWDIDH     50
                     |...|.|:||||||...|.::.|.:..:|||||.|...|...|.:|||..
BL00812___yul      1 MTILAFDLGASSGRAYAGHVDGGLIKAEEIHRFPNQPVQAGKHLYWDILR     50

BSNT_04589___     51 LLKQILQGLQKVKT-LGYEHCTVGIDTWAVDYVLLDEKGDRLREAISYRD     99
                     |..:|.||:.|.|. .|...| :|||:||||...||..|:.:.....|||
BL00812___yul     51 LYHEIKQGILKAKNGCGRISC-IGIDSWAVDVGFLDRNGELMGNPYHYRD     99

BSNT_04589___    100 RRTDHTIDKLEHTLSKAAIYQKTGIQFQPFNTIYQ---LYEEDRELLIKT    146
                     ..||..:.::.:.:.|..::.:||||..|||||:|   |.:.:..||...
BL00812___yul    100 PYTDGIMTEVLNEIGKEELFSRTGIQLLPFNTIFQLRALKKANSPLLDYA    149

BSNT_04589___    147 DKIMMIPDYLGYCLTGKAVTEITNASTTQLLNASTGNLDPELLEAVSVQE    196
                     |.::||||.|.|.|||:..:|.|||:||||.|..|.:.|.||:..:.:..
BL00812___yul    150 DTLLMIPDLLRYFLTGEKKSEFTNATTTQLFNPKTSDWDWELISLLGIPA    199

BSNT_04589___    197 QQF-APLTEPGCELGKLRNEWFPDYDLPACKVMTVATHDTASAVIAAPGI    245
                     :.| ..:.:||.|.|:|......:..:||..|:.|..|||||||:..|..
BL00812___yul    200 KIFPKDIAKPGSEAGRLSQSVCGELSVPAVPVIAVGEHDTASAVVGIPAE    249

BSNT_04589___    246 NDGWAYISSGTWSLIGVENKTPIITDLALENNYTNERGANNTIRFLKNII    295
                     .|.:||:..|||||||.|...|::|..||:.|:|||.||..|.||||||:
BL00812___yul    250 TDDFAYLICGTWSLIGTELDAPLMTKQALDWNFTNEGGAGGTFRFLKNIM    299

BSNT_04589___    296 GMWVIQEVRQQLQAD---YSFQQLAEEAKKTEPFQQFINLNDKRFLNPEN    342
                     |:|:.|..:...:.|   ||..:|.:.|.::|.|:..::.:|..||||.:
BL00812___yul    300 GLWLFQRCQADWEKDGISYSSAELVKLAGQSEAFRSAVDPDDPVFLNPVH    349

BSNT_04589___    343 MIKEIQHYCRQTRQKTPRTAGELACCIYSNLAIIYAIAIKELETITEKPI    392
                     |.:.|:.|||...|..|.|.|::..|:..:||..|....:.:||:|.|..
BL00812___yul    350 MPEAIREYCRAAGQHVPETPGQIIRCVLESLAFKYRFTFERIETLTGKEY    399

BSNT_04589___    393 EQFHIIGGGARNDFLNQLTADMSGKAVYAGPIEATATGNLLMQMIAAKEV    442
                     :..|:.|||.||:.|.|.||::..:.|:|||.||:|.||:.:|.:|....
BL00812___yul    400 DGLHMAGGGIRNELLCQYTANVLSRNVWAGPSEASAIGNIAVQAVALDMF    449

BSNT_04589___    443 KDIKEARQVVRNSFPIKVFTPKDIDR-STIIQSFQQTVLKALSK    485
                     .||:.||:.::.|||.|.:.|:|.:. ....:.:...:|.|.|:
BL00812___yul    450 WDIQSARKAIKASFPQKTYVPEDTEAWERAYRRYTSQILGAASR    493


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