Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03530 and BL00794

See DNA alignment / Visit BSNT_03530 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:31
# Commandline: needle
#    -asequence pep-align/BSNT_03530___yqjV.1.5803.seq
#    -bsequence pep-align/BL00794___yqjV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03530___yqjV-BL00794___yqjV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03530___yqjV-BL00794___yqjV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03530___yqjV
# 2: BL00794___yqjV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 415
# Identity:     254/415 (61.2%)
# Similarity:   326/415 (78.6%)
# Gaps:           8/415 ( 1.9%)
# Score: 1358.5
# 
#
#=======================================

BSNT_03530___      1 -MKKWKDIHPISWTIIIGTIFGRMATSMSIPFLAIYLTAVQGASASYAGL     49
                      .:||::|||:|||||:|||||||.|:|||||||||||.|:|||:.:||.
BL00794___yqj      1 MKQKWQNIHPLSWTIIVGTIFGRMGTAMSIPFLAIYLTQVKGASSGFAGA     50

BSNT_03530___     50 VIAASSSVGILASFYGGYISDKFGRKNMMLVSIFGWMLVFAGFAAASHLW     99
                     ||||||.:||.|||||||:||:||||.:||||||||..||||||.|.|:|
BL00794___yqj     51 VIAASSLIGIAASFYGGYLSDRFGRKTIMLVSIFGWTFVFAGFALADHVW    100

BSNT_03530___    100 VFFVVNALNGLCKSLFEPASKALLSDMTEEKTRLLVFNLRYAAINIGVVF    149
                     .||::|||||||::||||.|:|||||:::.:|||.||||||.|||:||||
BL00794___yqj    101 TFFIMNALNGLCRALFEPTSRALLSDVSKPETRLFVFNLRYTAINLGVVF    150

BSNT_03530___    150 GPVLGLYFGSSQSTTPFLVPAVIYGLYGIVLALQFKKHPSLSAPAQSRN-    198
                     ||:||||.|||::|.||.:.|.||.:|..||.:|||.|   :.||..|| 
BL00794___yqj    151 GPLLGLYLGSSKTTLPFFIAAFIYFIYAAVLVIQFKHH---TVPAAERNK    197

BSNT_03530___    199 -MSVREAFMVTQKDYLFTIALVGITLCTFGYSQFSSTFPQYMAQNPLIGN    247
                      :.||:|..||:.|.:|||.|:|..||.||||.|:||..||||.:|.|.:
BL00794___yqj    198 RIKVRDALEVTKTDRVFTITLIGSILCLFGYSHFTSTLAQYMAASPFIED    247

BSNT_03530___    248 GTKLYGLMLTLNAIVVLATQFPIVHFAKRFSPLCSLMLGNVMVSISMAIF    297
                     |||::|:||||||:.|||.|:||||.||||||:.||:.|||::|.|:...
BL00794___yqj    248 GTKVFGMMLTLNALAVLAVQYPIVHIAKRFSPILSLIAGNVLISGSLFSL    297

BSNT_03530___    298 TVSHGVPSIVMIVITFTIGEVLLFSMMDLYVDQIAKPGLKGTYFGAIGFS    347
                     :..|.:.|||:|:|.||||||||||||||.||:||:|.||||||||:||:
BL00794___yqj    298 SFFHDLWSIVLIIIVFTIGEVLLFSMMDLLVDRIARPELKGTYFGAMGFT    347

BSNT_03530___    348 QLGNVIGPWIGGICIDLFSAGRPIYIFSVLSGITLLGLPFLAFAYRQMKM    397
                     |||:|:|||.||:.:|.|.|.:|.:.|::||..|:.|:|||..|||::||
BL00794___yqj    348 QLGSVVGPWAGGMLLDTFGAEKPFFTFAILSAATICGVPFLVAAYRKLKM    397

BSNT_03530___    398 ETTKHRSRLEKPL--    410
                     :..|.....:|.:  
BL00794___yqj    398 DEAKVNLSSKKTMQH    412


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