Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03489 and BL00778

See DNA alignment / Visit BSNT_03489 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:28
# Commandline: needle
#    -asequence pep-align/BSNT_03489___sigF.1.5803.seq
#    -bsequence pep-align/BL00778___sigF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03489___sigF-BL00778___sigF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03489___sigF-BL00778___sigF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03489___sigF
# 2: BL00778___sigF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     230/255 (90.2%)
# Similarity:   244/255 (95.7%)
# Gaps:           0/255 ( 0.0%)
# Score: 1170.0
# 
#
#=======================================

BSNT_03489___      1 MDVEVKKNGKNAQLKDHEVKELIKQSQNGDQQARDLLIEKNMRLVWSVVQ     50
                     |||||||..:|.||||||||||||.||||||:||||||||||||||||||
BL00778___sig      1 MDVEVKKENQNTQLKDHEVKELIKNSQNGDQKARDLLIEKNMRLVWSVVQ     50

BSNT_03489___     51 RFLNRGYEPDDLFQIGCIGLLKSVDKFDLTYDVRFSTYAVPMIIGEIQRF    100
                     |||||||||||||||||||||||||||||:||||||||||||||||||||
BL00778___sig     51 RFLNRGYEPDDLFQIGCIGLLKSVDKFDLSYDVRFSTYAVPMIIGEIQRF    100

BSNT_03489___    101 IRDDGTVKVSRSLKELGNKIRRAKDELSKTLGRVPTVQEIADHLEIEAED    150
                     |||||||||||||||||||||||||||||:.||:||||||||:|||.:|:
BL00778___sig    101 IRDDGTVKVSRSLKELGNKIRRAKDELSKSNGRIPTVQEIADYLEISSEE    150

BSNT_03489___    151 VVLAQEAVRAPSSIHETVYENDGDPITLLDQIADNSEEKWFDKIALKEAI    200
                     ||:||||||:||||||||||||||||||||||||.|||||||||||||||
BL00778___sig    151 VVMAQEAVRSPSSIHETVYENDGDPITLLDQIADQSEEKWFDKIALKEAI    200

BSNT_03489___    201 SDLEEREKLIVYLRYYKDQTQSEVAERLGISQVQVSRLEKKILKQIKVQM    250
                     .||:||||||||||||||:||||||:|||||||||||||||||||||.||
BL00778___sig    201 KDLDEREKLIVYLRYYKDKTQSEVADRLGISQVQVSRLEKKILKQIKNQM    250

BSNT_03489___    251 DHTDG    255
                     ||.:.
BL00778___sig    251 DHFES    255


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