Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03491 and BL00776

See DNA alignment / Visit BSNT_03491 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:28
# Commandline: needle
#    -asequence pep-align/BSNT_03491___spoIIAA.1.5803.seq
#    -bsequence pep-align/BL00776___spoIIAA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03491___spoIIAA-BL00776___spoIIAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03491___spoIIAA-BL00776___spoIIAA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03491___spoIIAA
# 2: BL00776___spoIIAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 117
# Identity:      98/117 (83.8%)
# Similarity:   111/117 (94.9%)
# Gaps:           0/117 ( 0.0%)
# Score: 501.0
# 
#
#=======================================

BSNT_03491___      1 MSLGIDMNVKESVLCIRLTGELDHHTAETLKQKVTQSLEKDDIRHIVLNL     50
                     ||||||::||||||||||||||||||||||:::|:..||:.||||||:||
BL00776___spo      1 MSLGIDIHVKESVLCIRLTGELDHHTAETLRKQVSDHLEQTDIRHIVMNL     50

BSNT_03491___     51 EDLSFMDSSGLGVILGRYKQIKQIGGEMVVCAISPAVKRLFDMSGLFKII    100
                     .||||||||||||:|||||:|||:||||:|||||||||||||||||||||
BL00776___spo     51 ADLSFMDSSGLGVVLGRYKEIKQLGGEMIVCAISPAVKRLFDMSGLFKII    100

BSNT_03491___    101 RFEQSEQQALLTLGVAS    117
                     |.|||||:||.||||||
BL00776___spo    101 RLEQSEQRALETLGVAS    117


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.