Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03491 and BL00776
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence dna-align/BSNT_03491___spoIIAA.1.5803.seq
# -bsequence dna-align/BL00776___spoIIAA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03491___spoIIAA-BL00776___spoIIAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03491___spoIIAA-BL00776___spoIIAA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03491___spoIIAA
# 2: BL00776___spoIIAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 364
# Identity: 275/364 (75.5%)
# Similarity: 275/364 (75.5%)
# Gaps: 20/364 ( 5.5%)
# Score: 1013.0
#
#
#=======================================
BSNT_03491___ 1 ATGAGCCTTGGAATTGACATGAATGTCAAAGAATCTGTGCTTTGTATTCG 50
||||||||.|||||.||.||..|.|||||||||||.||..|.||.|||||
BL00776___spo 1 ATGAGCCTCGGAATCGATATTCACGTCAAAGAATCCGTATTATGCATTCG 50
BSNT_03491___ 51 ATTAACAGGCGAACTCGATCACCATACGGCTGAAACCCTGAAGCAAAA-- 98
.||.|||||.|||||||||||||||||.||.||||||.||| .||||
BL00776___spo 51 GTTGACAGGTGAACTCGATCACCATACAGCAGAAACCTTGA--GAAAACA 98
BSNT_03491___ 99 ----AGTGACTCAATCAT-TGGAGAAGGATGATATTCGCCATATCGTGCT 143
|||||| ||| ||||..|....||.|||||||||||.||..|
BL00776___spo 99 AGTCAGTGAC-----CATCTGGAACAAACCGACATTCGCCATATTGTCAT 143
BSNT_03491___ 144 GAA-CTTGGAGGACCTTTCCTTTATGGACAGCTCGGGGCTTGGCGTTATT 192
||| ||||.| ||||||||.|||||||||||.||.|||||||||||..|.
BL00776___spo 144 GAATCTTGCA-GACCTTTCGTTTATGGACAGTTCAGGGCTTGGCGTCGTG 192
BSNT_03491___ 193 TTAGGAAGATACAAGCAAATTAAGCAAATTGGCGGGGAAATGGTCGTTTG 242
.|.||.|||||.|||.|.||||||||..|.|||||.||||||.||||.||
BL00776___spo 193 CTCGGCAGATATAAGGAGATTAAGCAGCTCGGCGGAGAAATGATCGTCTG 242
BSNT_03491___ 243 CGCTATCTCTCCTGCGGTGAAGCGATTGTTTGATATGTCGGGTCTGTTTA 292
|||.||.||.|||||.||.||.||.||.|||||||||||.||.|||||||
BL00776___spo 243 CGCCATTTCCCCTGCTGTCAAACGTTTATTTGATATGTCCGGGCTGTTTA 292
BSNT_03491___ 293 AAATTATCCGATTTGAACAATCTGAACAGCAGGCGCTCCTGACAC--TGG 340
||||.||.||..||||.|||||.||.|||| |.||.|.|||.|| |||
BL00776___spo 293 AAATCATTCGCCTTGAGCAATCAGAGCAGC--GTGCACTTGAAACGTTGG 340
BSNT_03491___ 341 GGGTGGCATCATGA 354
|||||||.||||||
BL00776___spo 341 GGGTGGCGTCATGA 354
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