Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03858 and BL00760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence pep-align/BSNT_03858.1.5803.seq
# -bsequence pep-align/BL00760.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03858-BL00760.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03858-BL00760.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03858
# 2: BL00760
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity: 31/128 (24.2%)
# Similarity: 38/128 (29.7%)
# Gaps: 87/128 (68.0%)
# Score: 173.0
#
#
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BSNT_03858 1 MPRPRDPRREEAFRLWEESCGSKKLKDIAEELGIKSNTIRK--------- 41
|.|||||||:||||||:||.|:|||||||:|||:.|:|:||
BL00760 1 MARPRDPRRDEAFRLWKESSGTKKLKDIADELGVSSSTVRKWKAIDKWED 50
BSNT_03858 41 -------------------------------------------------- 41
BL00760 51 KIKGSAPKSNGSAPFRPSAPIGNKNAKGNKGGNAPPGNENAKGNAAPKGN 100
BSNT_03858 41 ---------------------------- 41
BL00760 101 KNSARTGEYETIMWDFLNEDERQLFGEI 128
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