Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03858 and BL00760
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence dna-align/BSNT_03858.1.5803.seq
# -bsequence dna-align/BL00760.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03858-BL00760.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03858-BL00760.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03858
# 2: BL00760
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity: 94/387 (24.3%)
# Similarity: 94/387 (24.3%)
# Gaps: 261/387 (67.4%)
# Score: 342.0
#
#
#=======================================
BSNT_03858 1 ATGCCAAGACCACGTGATCCACGCAGAGAGGAAGCTTTTCGTTTGTGGGA 50
|||.|.|||||.|||||||||.|..|.||.|||||.||.|||||.|||.|
BL00760 1 ATGGCCAGACCGCGTGATCCAAGACGTGACGAAGCGTTCCGTTTATGGAA 50
BSNT_03858 51 AGAGAGCTGCGGGAGCAAGAAGTTAAAAGACATTGCCGAGGAATTAGGTA 100
|||.|||.||||.|.||||||.|||||||||||.||.||.|||||.||..
BL00760 51 AGAAAGCAGCGGAACCAAGAAATTAAAAGACATCGCGGATGAATTGGGCG 100
BSNT_03858 101 TCAAAAGCAACACTATTCGCAAATGA------------------------ 126
||..|||||..||..|.|||||.||.
BL00760 101 TCTCAAGCAGTACCGTCCGCAAGTGGAAAGCAATAGATAAATGGGAAGAT 150
BSNT_03858 126 -------------------------------------------------- 126
BL00760 151 AAAATCAAAGGGAGCGCTCCTAAATCGAATGGGAGCGCTCCTTTTCGTCC 200
BSNT_03858 126 -------------------------------------------------- 126
BL00760 201 CAGCGCTCCAATAGGCAATAAAAACGCCAAAGGAAACAAGGGCGGGAATG 250
BSNT_03858 126 -------------------------------------------------- 126
BL00760 251 CACCGCCTGGAAACGAAAATGCGAAAGGGAATGCCGCACCAAAAGGAAAT 300
BSNT_03858 126 -------------------------------------------------- 126
BL00760 301 AAAAATTCCGCCCGTACCGGCGAATATGAAACGATCATGTGGGATTTTTT 350
BSNT_03858 126 ------------------------------------- 126
BL00760 351 AAACGAGGATGAGAGACAGCTGTTCGGAGAAATCTAA 387
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