Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04943 and BL00741

See DNA alignment / Visit BSNT_04943 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:08
# Commandline: needle
#    -asequence pep-align/BSNT_04943___yvrD.1.5803.seq
#    -bsequence pep-align/BL00741___yvrD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04943___yvrD-BL00741___yvrD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04943___yvrD-BL00741___yvrD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04943___yvrD
# 2: BL00741___yvrD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 263
# Identity:     195/263 (74.1%)
# Similarity:   227/263 (86.3%)
# Gaps:           0/263 ( 0.0%)
# Score: 1011.0
# 
#
#=======================================

BSNT_04943___      1 MDLQLKDKLVLITGSTSGIGKAAAKSFLQEGAAVIVNGRKQETVNRTIEE     50
                     |||:||:||||:||||:|||||.|::||.|||.||||||.:|.|...::|
BL00741___yvr      1 MDLKLKNKLVLVTGSTAGIGKATAEAFLAEGAEVIVNGRTEEKVQSVVDE     50

BSNT_04943___     51 LSGYGTVHGAAADLSKTDEAAAFIEKVNEIGDIDILVNNLGFFEVKDFAD    100
                     ||.:|.|||.|.|||..:|:.|.:||..|||::|:||||:||||||||.|
BL00741___yvr     51 LSRHGNVHGIATDLSDPEESRALVEKTAEIGELDVLVNNMGFFEVKDFTD    100

BSNT_04943___    101 VTDEEWNQYFEVNVMSAVRTSRHFLPKMLAKNSGRILNIASEAGVKPLPT    150
                     ||||||.:||||||:||||..|.|||.||.:|.||:||:|||||:||||.
BL00741___yvr    101 VTDEEWLKYFEVNVLSAVRLCRAFLPAMLKRNKGRVLNLASEAGIKPLPQ    150

BSNT_04943___    151 MIPYSMTKTALISLSRGMAEMTKGTNVTVNSVLPGPTWTEGVASYMEGAA    200
                     |||||||||||||||||:|||||||||||||||||||||||||:||||||
BL00741___yvr    151 MIPYSMTKTALISLSRGLAEMTKGTNVTVNSVLPGPTWTEGVANYMEGAA    200

BSNT_04943___    201 KAAGQDTDTFIKDYFKVNEPTSLIQRYATAEEVANTIVFLASDAASAING    250
                     .....|.|||:|||||||||||||||||..||||:|||:|||:.|:||||
BL00741___yvr    201 AQEKTDLDTFVKDYFKVNEPTSLIQRYAKPEEVASTIVYLASEKAAAING    250

BSNT_04943___    251 TAQRVEGGIIRSL    263
                     :|||||||||||:
BL00741___yvr    251 SAQRVEGGIIRSI    263


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