Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04911 and BL00734
See
DNA alignment /
Visit
BSNT_04911 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:05
# Commandline: needle
# -asequence pep-align/BSNT_04911___yvtA.1.5803.seq
# -bsequence pep-align/BL00734___htrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04911___yvtA-BL00734___htrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04911___yvtA-BL00734___htrB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04911___yvtA
# 2: BL00734___htrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 467
# Identity: 292/467 (62.5%)
# Similarity: 349/467 (74.7%)
# Gaps: 20/467 ( 4.3%)
# Score: 1452.0
#
#
#=======================================
BSNT_04911___ 1 MDYRRDGQNDQHQTEPSHTEQQ------NTENQKLIGHSEQELL---DVP 41
||:|||.:......|..|.|.| :.|.|......|.||: |..
BL00734___htr 1 MDFRRDDEQKHANEEQFHEEAQTPQTAGSEEQQSEQPAKEPELILKKDTD 50
BSNT_04911___ 42 VSYEAGRQETASALEMEKQETAVKKEKKRRAAWLSPILGGIIGGGLMLGI 91
...:...:|||:||| :.:||...|||:|:|:||||||||||||||:|||
BL00734___htr 51 DQSDLTNKETAAALE-DARETRAAKEKRRKASWLSPILGGIIGGGLVLGI 99
BSNT_04911___ 92 APYLPSDQNQATETASANKQVQSDNFTTAPITNASNIADMVEDLEPTIVG 141
:||||.|....|......:..||.||||.|:|||.|:.||||||||.|||
BL00734___htr 100 SPYLPGDHPSETAGTGQTEPKQSQNFTTKPVTNADNVPDMVEDLEPAIVG 149
BSNT_04911___ 142 ISNIQTSQNNTFGTGGGSSSESESGTGSGVIFKKDSNKAYIITNNHVVEG 191
:|||||| .|.......|||||||||||||..|||||||||||||
BL00734___htr 150 VSNIQTS------FGFSEDDVEESGTGSGVIFKKDGGKAYIITNNHVVEG 193
BSNT_04911___ 192 ANKLTVTLYNGETETAKLVGSDTITDLAVLEISSKNVKKVASFGDSSQLR 241
|:|:|::||||:|..||::|||.:|||||||||||.|.||||||||::||
BL00734___htr 194 ASKVTISLYNGKTADAKIIGSDALTDLAVLEISSKGVDKVASFGDSAKLR 243
BSNT_04911___ 242 TGEKVIAIGNPLGQQFSGTVTQGIISGLNRTIDVDTTQGTVEMNVLQTDA 291
.||||||||||||.|||.|||:|||||:||||:|.|::|..:||||||||
BL00734___htr 244 AGEKVIAIGNPLGLQFSRTVTEGIISGVNRTIEVSTSEGNWDMNVLQTDA 293
BSNT_04911___ 292 AINPGNSGGPLINASGQVIGINSLKVSENGVESLGFAIPSNDVEPIVDQL 341
|||||||||||||:|||||||||||:|::||||||||||||||:||||:|
BL00734___htr 294 AINPGNSGGPLINSSGQVIGINSLKISQSGVESLGFAIPSNDVQPIVDEL 343
BSNT_04911___ 342 LQNGKVDRPFLGVQMIDMSQVPETYQENTLGLFGDQLGKGVYVKEVQANS 391
|:.|||:|||||||||||.||||.||:||||||||||.||||:.:|...|
BL00734___htr 344 LEKGKVERPFLGVQMIDMQQVPEQYQQNTLGLFGDQLNKGVYIDKVSPKS 393
BSNT_04911___ 392 PAEKAGIKSEDVIVKLNGKDVESSADIRQILYKDLKVGDKTTIQVLRKGK 441
||..||:|:.|||.|:|||:||:::|:|:|||.:.|.||..|.:|||.||
BL00734___htr 394 PAADAGMKAGDVITKMNGKNVETTSDLRKILYTEAKAGDTVTFEVLRNGK 443
BSNT_04911___ 442 TKTLNATLTKQTESSSS 458
..|:.|.|.|...
BL00734___htr 444 QTTMKAKLAKSKS---- 456
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.