Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04924 and BL00730

See DNA alignment / Visit BSNT_04924 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:06
# Commandline: needle
#    -asequence pep-align/BSNT_04924___yvqC.1.5803.seq
#    -bsequence pep-align/BL00730___liaR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04924___yvqC-BL00730___liaR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04924___yvqC-BL00730___liaR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04924___yvqC
# 2: BL00730___liaR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity:     177/211 (83.9%)
# Similarity:   193/211 (91.5%)
# Gaps:           0/211 ( 0.0%)
# Score: 881.0
# 
#
#=======================================

BSNT_04924___      1 MIRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAAELSPDV     50
                     ||||||||||||||||||||||:|||||||||||||..||.||.|..|||
BL00730___lia      1 MIRVLLIDDHEMVRMGLAAFLESQPDIEVIGEASDGKRGVELALETKPDV     50

BSNT_04924___     51 ILMDLVMEGMDGIQATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALS    100
                     |||||||||||||:|||||||:|:||||||||||:|||||||||||||||
BL00730___lia     51 ILMDLVMEGMDGIEATKQICRQLADPKIIVLTSFVDDDKVYPVIEAGALS    100

BSNT_04924___    101 YLLKTSKAAEIADAIRAASKGEPKLESKVAGKVLSRLRHSGENELPHESL    150
                     ||||||||:||||||||||.||||||:||||||||:||||...:..|:||
BL00730___lia    101 YLLKTSKASEIADAIRAASVGEPKLEAKVAGKVLSKLRHSAGEQPLHQSL    150

BSNT_04924___    151 TKRELEILFLIAEGKTNKEIGEELFITIKTVKTHITNILSKLDVSDRTQA    200
                     |.||||||.|:|||||||.|.|||:|||||||||:|||||||:|.|||||
BL00730___lia    151 TARELEILKLVAEGKTNKGIAEELYITIKTVKTHVTNILSKLEVDDRTQA    200

BSNT_04924___    201 AVYAHRNHLVN    211
                     |:|||||.||:
BL00730___lia    201 AIYAHRNKLVD    211


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