Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04938 and BL00718
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:07
# Commandline: needle
# -asequence pep-align/BSNT_04938___yvrA.1.5803.seq
# -bsequence pep-align/BL00718___yvrA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04938___yvrA-BL00718___yvrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04938___yvrA-BL00718___yvrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04938___yvrA
# 2: BL00718___yvrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 202/450 (44.9%)
# Similarity: 269/450 (59.8%)
# Gaps: 30/450 ( 6.7%)
# Score: 848.0
#
#
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BSNT_04938___ 1 MMKAEGLSGGYGDSRLINNVSLTVEKGEFLGILGPNGSGKTTLLHLLTGT 50
|:....:|||||.:.::.::|..|:.||||||||||||||||||.:|:||
BL00718___yvr 1 MIDVIRVSGGYGKTDVLQDISFAVKPGEFLGILGPNGSGKTTLLKMLSGT 50
BSNT_04938___ 51 LPAKEGRVYLAGKLLADYKPKELAQIMAVLPQKTDQAFTFTVEETVAFGR 100
:..:.|.|.|..:.:.:||.||||:.||||||||:|||:|||||||.|||
BL00718___yvr 51 IAPRSGEVLLECRSVGEYKTKELARKMAVLPQKTEQAFSFTVEETVQFGR 100
BSNT_04938___ 101 YPFQTGLFRQQTEKDEAIVQEAMEQTGVADFAQKPIRELSGGEQQRVYLA 150
|.:|.|||||.|.:|..||:..|:||....||||.|.|||||||||||||
BL00718___yvr 101 YAYQAGLFRQLTAEDHDIVKRVMKQTDTLRFAQKSIHELSGGEQQRVYLA 150
BSNT_04938___ 151 QALAQQPRILFLDEPTNFLDLAYQKDLLDLIKRLTRESGLAAVSVFHDLN 200
|||||:|..|.|||||:||||::||.||||:|:.|..|.||.|.||||:|
BL00718___yvr 151 QALAQEPEYLLLDEPTSFLDLSFQKSLLDLMKQETAASKLAVVGVFHDVN 200
BSNT_04938___ 201 TASLYCDELMFMKNGTAGPKQKPEYAVTEQSIKAVYDTDVTALVHQSSPK 250
.||||||.|:.:|:|.|....:||.|::...|..|||||:|.|.|.....
BL00718___yvr 201 IASLYCDRLLLLKDGKAEVLDRPEAALSAGRIGRVYDTDITGLDHPQRSN 250
BSNT_04938___ 251 PMIVIQPEKDSVKQQSIPF---EALLQAGRDDILLQTEIPLRTLSSTPIG 297
|...|..: ::.:::.|. |.:.|.....|....:.|||.|||.
BL00718___yvr 251 PQFTIMAK--NIPRKTEPLFLKERIEQYLPHGIAFLADRPLRLLSSE--- 295
BSNT_04938___ 298 AGFSWSRTLIHKRLPDQPDPIEGLTACLSESGFQLQETCAMASSERLDHF 347
.||:|.|.||.....:...| .|.:|...|:.| :|....:|.. |.
BL00718___yvr 296 RGFAWRRKLIFDSGNNSGWP-HGSSAFEQETLF-IQHDAELADC----HI 339
BSNT_04938___ 348 VYRTYEDGELSVFICVQT--GFSIWILINGYAADQFFIKALMAA--EAER 393
| .|.|:|.:.....| ...:|:|::|...|..|:||:.|| .|.:
BL00718___yvr 340 V---SESGDLCIVGMKDTMGRLIMWVLVDGCLQDGQFVKAISAAAFAAAQ 386
BSNT_04938___ 394 TKVLGDGRGTGDILIAATQTQQSENIEQRLNQLIKKGTAECIKEAAELFE 443
..| ...|:|:||||:.:|.:....|.|:..| ||.|:|...:
BL00718___yvr 387 HHV-----PCSDVLVAATQSGRSADQTAFLTQIQNK-TAACVKALKD--- 427
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