Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04939 and BL00716
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:07
# Commandline: needle
# -asequence pep-align/BSNT_04939___yvrB.1.5803.seq
# -bsequence pep-align/BL00716___yvrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04939___yvrB-BL00716___yvrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04939___yvrB-BL00716___yvrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04939___yvrB
# 2: BL00716___yvrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 354
# Identity: 234/354 (66.1%)
# Similarity: 273/354 (77.1%)
# Gaps: 27/354 ( 7.6%)
# Score: 1161.0
#
#
#=======================================
BSNT_04939___ 1 --------------------------MSVILGISCGSLHIPIPAVFRVFW 24
.||::|||.|||.||||::.:||.
BL00716___yvr 1 MLNIFTLTFLRNNRFAAYAFSLLFLSASVLMGISIGSLEIPIPSIMKVFL 50
BSNT_04939___ 25 HQGFGGSIGSDDPMYTNIMMNIRLPRVVLAALVGAALSIAGAAFQGLLKN 74
.:.||....:.||...||:|.||||||||||||||.|:.|||.|||||||
BL00716___yvr 51 EEWFGIQGLNPDPTEANIIMKIRLPRVVLAALVGAGLAAAGAGFQGLLKN 100
BSNT_04939___ 75 PLADPYTLGVSSGASVGAVVTLFLGLHLPVIGGFTLPVVSVAAALATMAA 124
|||||||||:||||:||||||||.|:.|||||.||||.:|||||:..:..
BL00716___yvr 101 PLADPYTLGISSGAAVGAVVTLFFGIQLPVIGSFTLPFLSVAAAVIVIFL 150
BSNT_04939___ 125 VLFFSRLVHASMSVSTLILTGVITNSFLGAFISLIIALTGDNLLPIVHWL 174
||||:||||.|:::|.|||||:|.:|||||.|||:||||||:|.||||||
BL00716___yvr 151 VLFFARLVHPSLTLSALILTGIIFSSFLGALISLMIALTGDDLKPIVHWL 200
BSNT_04939___ 175 LGSVSMRGWSYVILFLPFFLLGTILLIINGRELNVMTYGEDKAKLLGVSV 224
|||||||||.||.||||||..|...|:|:|||||||||||:||:||||:|
BL00716___yvr 201 LGSVSMRGWGYVALFLPFFAAGAAALLISGRELNVMTYGEEKARLLGVNV 250
BSNT_04939___ 225 QQRKMLILIAGSLLTGSAVAVSGTIGFVGLVIPHITRLLWGTDHRHLLPL 274
::.|.::|:||::|||||||||||||||||||||..|||..|||||||||
BL00716___yvr 251 KRSKYIVLLAGAILTGSAVAVSGTIGFVGLVIPHFIRLLSITDHRHLLPL 300
BSNT_04939___ 275 SALLGAGFLVLADLLSRTIIEPIELPIGIITSLAGAPVFALILIRQHRGG 324
|.|.||.||||:||||||||||.||||||||:|.|||||..||||::|||
BL00716___yvr 301 SMLNGASFLVLSDLLSRTIIEPSELPIGIITALIGAPVFGFILIRRYRGG 350
BSNT_04939___ 325 RSL- 327
|..
BL00716___yvr 351 RVHD 354
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