Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04940 and BL00715

See DNA alignment / Visit BSNT_04940 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:08
# Commandline: needle
#    -asequence pep-align/BSNT_04940___yvrC.1.5803.seq
#    -bsequence pep-align/BL00715___yvrC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04940___yvrC-BL00715___yvrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04940___yvrC-BL00715___yvrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04940___yvrC
# 2: BL00715___yvrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity:     219/319 (68.7%)
# Similarity:   252/319 (79.0%)
# Gaps:           8/319 ( 2.5%)
# Score: 1067.0
# 
#
#=======================================

BSNT_04940___      1 MKKRAGIWTALLLAVVMLAGCG---NPAD-QKDSKAKQKTEVFPVTIDDA     46
                     |||...:..:||||..:|:|||   .||| ||..||   .|.|||||.||
BL00715___yvr      1 MKKFGLLLLSLLLAAGVLSGCGQAQKPADEQKQEKA---AEAFPVTIKDA     47

BSNT_04940___     47 SNQDVTIKKEPKKIVSLMPSNTEITYALGLGDKVVGVTTNDTYPKEVKKV     96
                     |.|:|.|:|||||||||||||||||||||||.||||||..||||||||.|
BL00715___yvr     48 SGQEVKIEKEPKKIVSLMPSNTEITYALGLGKKVVGVTDFDTYPKEVKNV     97

BSNT_04940___     97 EKVGDMNVNVEKVISLKPDLVLAHESSMSASADAIKQLKDAGITVLTVND    146
                     ||:|.|..|.||:|||.|||||||.|||.::.:.:||||||||||:||||
BL00715___yvr     98 EKIGGMEFNTEKIISLNPDLVLAHASSMQSAEEGLKQLKDAGITVVTVND    147

BSNT_04940___    147 AQSFSEVYKSIEMIGEAGGAEKKADQLVKSMKSDLKDIQEKAKTISKDEE    196
                     |.||.|.|:||||||:|.|||.:|..|||||||||..|:|||..|||.::
BL00715___yvr    148 AASFEETYRSIEMIGKAAGAEDQAASLVKSMKSDLAGIKEKAAAISKADQ    197

BSNT_04940___    197 KSVFIEVSPDPDIYTTGKDTFMNEMLNVIHAKNAAADQTGWVQMTDEAIV    246
                     |.||:||||.||||||||.|||||||..|||:|||:.|.||.::|:||||
BL00715___yvr    198 KKVFVEVSPAPDIYTTGKGTFMNEMLEAIHAENAASAQKGWAKITEEAIV    247

BSNT_04940___    247 KLNPDAIVTTDGVKA-KAVEKRDGWSEINAVKHHRVYDVDPDLVTRSGPR    295
                     ||||||||||:|..| ..::||.|||.:.|||::.|||||||||||.|||
BL00715___yvr    248 KLNPDAIVTTNGESAVSEIKKRSGWSGVKAVKNNEVYDVDPDLVTRPGPR    297

BSNT_04940___    296 LIEGVEELAESIYPDTFKE    314
                     ||:|||||||.||||.||:
BL00715___yvr    298 LIKGVEELAEHIYPDVFKK    316


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