Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02097 and BL00710

See DNA alignment / Visit BSNT_02097 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:35
# Commandline: needle
#    -asequence pep-align/BSNT_02097___exuR.1.5803.seq
#    -bsequence pep-align/BL00710___exuR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02097___exuR-BL00710___exuR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02097___exuR-BL00710___exuR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02097___exuR
# 2: BL00710___exuR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 334
# Identity:     199/334 (59.6%)
# Similarity:   261/334 (78.1%)
# Gaps:           3/334 ( 0.9%)
# Score: 1038.0
# 
#
#=======================================

BSNT_02097___      1 -MVTIKDIAKLANVSHTTVSRALNNSPYIKEHTKKKILELAEQLNYTPNV     49
                      .|||||||:|||||||||||||||||.|||:||||||::|.::||.||.
BL00710___exu      1 MSVTIKDIARLANVSHTTVSRALNNSPLIKENTKKKILDIAAEMNYKPNF     50

BSNT_02097___     50 NAKSLAMQKSHTIGLFFTSITNGTSHSFFADTIKGVNQAISEDYNLYVRG     99
                     |||||..|||.|||||.||:|:|||.|||||.::|||:.|.|:||:.|||
BL00710___exu     51 NAKSLVTQKSFTIGLFLTSLTDGTSSSFFADILRGVNKVIDENYNMVVRG    100

BSNT_02097___    100 IDDLKNYDSVTPMRYDGIILMSQSDIDNSFIYHIREKNIPLVVLNRDIDD    149
                     |||..:..|:...||||:||:|||:.|.:||.|:.::|||:|||||.|:.
BL00710___exu    101 IDDYHDLSSIHRNRYDGMILISQSEQDQAFIEHVLKQNIPVVVLNRKIEG    150

BSNT_02097___    150 RTITNILSNDKEGSQEAVEYFIQSGHQDIAIIEGIEGFKSSQQRKEGYLS    199
                     .::.|||:|:.||:..|..|.|::||:.||:::|.|||||||:||.|:|.
BL00710___exu    151 HSVVNILANEHEGAFLAASYLIKNGHKQIAMVQGKEGFKSSQERKGGFLR    200

BSNT_02097___    200 ALIQHHIPIKHEYSVKGQYDMESGFQAMERLLALPNPPTAVFCSNDDMAI    249
                     ||...::.:..||.|:|.|.|:|||:|.|.||.|.|||||:||:||||||
BL00710___exu    201 ALRDSNLDMPGEYLVQGDYTMQSGFRAAETLLKLKNPPTALFCANDDMAI    250

BSNT_02097___    250 GAMNAIFAKGLRVPDDISVIGFDDIGFSQYITPRLTTVKRPVEKISVLGA    299
                     |||||::|.|.|.||::|:|||||.|||.|.||.|||||:|.||||:|||
BL00710___exu    251 GAMNALYANGKRCPDNMSIIGFDDSGFSAYTTPSLTTVKKPTEKISMLGA    300

BSNT_02097___    300 QKLLSLISEPETKAEKILENTKFMVRDSVRRLTT    333
                     :.|||||..|:.:..:.|.:|:.::|:||:.|  
BL00710___exu    301 ESLLSLIENPQAEGGQTLISTELIIRNSVKHL--    332


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