Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04947 and BL00707

See DNA alignment / Visit BSNT_04947 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:08
# Commandline: needle
#    -asequence pep-align/BSNT_04947___yvrG.1.5803.seq
#    -bsequence pep-align/BL00707___yvrG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04947___yvrG-BL00707___yvrG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04947___yvrG-BL00707___yvrG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04947___yvrG
# 2: BL00707___yvrG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 585
# Identity:     317/585 (54.2%)
# Similarity:   450/585 (76.9%)
# Gaps:           5/585 ( 0.9%)
# Score: 1811.0
# 
#
#=======================================

BSNT_04947___      1 MRLRWKFLFHFFGQMLIVILLLTVMLVASFFYLDARFSDAESNSGLTKAT     50
                     |:||.|.:.||..|:.:::.|:...|:.||.:...|.|::|:::||.|||
BL00707___yvr      1 MKLRGKLVLHFVSQIFLILGLVLATLLLSFIFFALRLSESEADTGLAKAT     50

BSNT_04947___     51 TDTLEAYLDVNEDGTWEVDNFLKKSVDKQHGWMQIIDSEGNTDYSYGVPK    100
                     :||.|:::.|:::..|::::.||.::|||.||:||:|.:..|.|||.:|.
BL00707___yvr     51 SDTFESWVSVDDNNNWQIEDILKSAIDKQGGWLQILDGKEKTVYSYRLPA    100

BSNT_04947___    101 DVPGTYTKKELLSIYKTKKLHNYKLNYWAINIEDKSYLLLSGWKSKSEQL    150
                     ::...|.:::|:|::..|::..|::|:|:.|...:.|::|.||:|||:.:
BL00707___yvr    101 EIQRQYHREDLVSVFDKKRIKKYQVNFWSANFNGEDYVILFGWESKSDTI    150

BSNT_04947___    151 LTSVEKREQKIDSLAHYKSSTIDYIKRKKGAIYLLDSNGKILDSINSTKS    200
                     |:.:||.|:.:..|:.||.||:|:||:.||::||....||:||||.....
BL00707___yvr    151 LSYLEKEEKDMADLSSYKKSTLDFIKKNKGSVYLFSEKGKMLDSIYQDID    200

BSNT_04947___    201 ERKTMNQLELLKYSSKPWNYKREISVKILNKDRWMVATVPNPVYVTDQEF    250
                     ..:.:|:||||||.||||||:.|.|.:.|:...|::|..|||::..|.||
BL00707___yvr    201 YSQGINELELLKYGSKPWNYEHEFSYRRLSATEWLIAATPNPIFNPDHEF    250

BSNT_04947___    251 NKSFLKVVLKAMFLVMAVLFMYIIWMTVWYMFRFGLPIFHTIRWLVNLSK    300
                     |::.:.:.||.:.:|:.||.:.:..||:||.||||:||.|||:|:|||||
BL00707___yvr    251 NRTMIGLALKIVLIVIGVLILLMSSMTIWYSFRFGMPIIHTIKWIVNLSK    300

BSNT_04947___    301 GKLEEPRNRDGRPVSKNKKGKIKQPYRFFGEIFESMDQLTETLRRDKRNR    350
                     |:.||||||.|||.|:|||||.|||||.|.|:||||:||||||::|::||
BL00707___yvr    301 GRFEEPRNRKGRPRSRNKKGKRKQPYRLFTEVFESMEQLTETLKKDEQNR    350

BSNT_04947___    351 EKIQATREEWIAGLSHDLKTPLSSIYGYSMMLESKQYDWSPEEVKEMGQV    400
                     :|||.||||||||||||||||||:||||||||||..|:||.||::|:||.
BL00707___yvr    351 KKIQTTREEWIAGLSHDLKTPLSTIYGYSMMLESPNYEWSKEEIREIGQA    400

BSNT_04947___    401 VREKSEYMSKLIEDLNLTYRLKNDALPIERNLTSLIPFFKNVIEDFKKNP    450
                     ::|||:|||:||||||||||||||||||:|....|:||.|:.:|:||::.
BL00707___yvr    401 MKEKSDYMSQLIEDLNLTYRLKNDALPIKRQTVRLVPFLKSFVEEFKRHS    450

BSNT_04947___    451 FSEGYDISFVSKEEHIEFALDEAWFRRILENLLGNAVKHNGKGTEIQVIL    500
                     |||||::||..|:...|||:|..||||:|||||.||||||.|||:|:|||
BL00707___yvr    451 FSEGYNVSFEYKQVDTEFAIDRGWFRRVLENLLANAVKHNKKGTDIKVIL    500

BSNT_04947___    501 EQTKNHISLKVKDNGKGMDEETITHLFNRYYRGTNTKDSTAGTGLGLAIA    550
                     |::|.:|.||::|||:|||.||:::|||||||||:|||:|.|:||||||:
BL00707___yvr    501 EESKQYIILKIQDNGRGMDSETVSNLFNRYYRGTHTKDATEGSGLGLAIS    550

BSNT_04947___    551 KELVHLHNGTIHVNSRMNIGTVITILFKKQ-----    580
                     .||||||:|.|.|:||...||.||:.|||.     
BL00707___yvr    551 LELVHLHDGCIAVDSRTGRGTEITMEFKKNPKAAK    585


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