Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02796 and BL00692
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:33
# Commandline: needle
# -asequence pep-align/BSNT_02796___ymaB.1.5803.seq
# -bsequence pep-align/BL00692___ymaB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02796___ymaB-BL00692___ymaB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02796___ymaB-BL00692___ymaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02796___ymaB
# 2: BL00692___ymaB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 206
# Identity: 154/206 (74.8%)
# Similarity: 176/206 (85.4%)
# Gaps: 1/206 ( 0.5%)
# Score: 797.0
#
#
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BSNT_02796___ 1 MGKMDEMILVAPRDDVFKKESLTFQGVYSEDSRVAEIMAQIEAAYREMRR 50
||||||||||.||::||..|:||||||.|:...:.:|||.||..:.||||
BL00692___yma 1 MGKMDEMILVVPRENVFANETLTFQGVNSDGETIGKIMAHIERHFSEMRR 50
BSNT_02796___ 51 GDAEEDPRFKQPIPYVVIKREDEVFLYERLAGGGESRLHNKLSLGFGGHM 100
|||||||.|||||||||||||||:|:||||.||||:||||||||||||||
BL00692___yma 51 GDAEEDPAFKQPIPYVVIKREDEIFVYERLEGGGEARLHNKLSLGFGGHM 100
BSNT_02796___ 101 NAIEGAASFAEVLKLNTDRELEEELQINEEDKQAIVTLGLINDDENSVGK 150
|..|| ..|.::|||||||||:|||.|.|..|:.:|||||||||||||||
BL00692___yma 101 NFAEG-LDFPDILKLNTDRELDEELLIEESAKEKMVTLGLINDDENSVGK 149
BSNT_02796___ 151 VHIGILSALQLKPGAQVEVKEKEQIAGKWMKVSELKQDDIYNRLETWSQF 200
|||||||||:|||||.|||||||||||:|||.|:||:..:|:|||:||||
BL00692___yma 150 VHIGILSALELKPGAHVEVKEKEQIAGRWMKASDLKEKSVYDRLESWSQF 199
BSNT_02796___ 201 VVDILE 206
|||||.
BL00692___yma 200 VVDILV 205
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