Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02079 and BL00688

See DNA alignment / Visit BSNT_02079 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence pep-align/BSNT_02079___yjlA.1.5803.seq
#    -bsequence pep-align/BL00688___yjlA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02079___yjlA-BL00688___yjlA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02079___yjlA-BL00688___yjlA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02079___yjlA
# 2: BL00688___yjlA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 326
# Identity:     185/326 (56.7%)
# Similarity:   237/326 (72.7%)
# Gaps:           6/326 ( 1.8%)
# Score: 945.5
# 
#
#=======================================

BSNT_02079___      1 MKAIVIGILASLFFAVTFILNRAMELSGGSWLWSSSLRFIFMVPFLCLIV     50
                     |:.|::|:.|:.|||.||:|||||||.||||:||:|||||||.|.|..||
BL00688___yjl      1 MRPIILGVFAAFFFAFTFVLNRAMELEGGSWIWSASLRFIFMAPLLFAIV     50

BSNT_02079___     51 IMRGTFTPLLLEMRKKPFYWIKWSFVGFVLFYAPITFAAAYGPGWLIAGT    100
                     .:||....|..|::|.|..|::||.:||.|||||:.||||||||||||||
BL00688___yjl     51 WLRGNVKELFQEIKKAPGIWVRWSIIGFGLFYAPLCFAAAYGPGWLIAGT    100

BSNT_02079___    101 WQITIVAGVLLSPLFYVKQDMPGGPQFVRQKIPLVSLGTSMIILIGAALI    150
                     |||||::|.||:||||.......||..:|.|||...|..|.|||||.||:
BL00688___yjl    101 WQITIISGSLLAPLFYETVQTKTGPVQIRGKIPYKGLTMSFIILIGVALM    150

BSNT_02079___    151 QLQHAESLSGRMLLFSVLPVVIAAFAYPLGNRRMLEEYGGRLDTFQRVLG    200
                     |.:||..||...:|..:.||::|:||||||||:|:|...||||.:|||||
BL00688___yjl    151 QAEHAAQLSLHEMLLCIAPVILASFAYPLGNRKMMEVCAGRLDAYQRVLG    200

BSNT_02079___    201 MTLASLPFWLILAAYGWWSDGLPTASQTVQSFIVAVSSGIIATVLFFWAT    250
                     ||||||||||||:.||..|.|.|:..|.:||.:|||.|||.||||||.||
BL00688___yjl    201 MTLASLPFWLILSLYGLASAGAPSRGQVIQSGLVAVFSGICATVLFFAAT    250

BSNT_02079___    251 DMVRDNPQKLAAVEATQSGEVIFALLGEIVLLSGVFPSLLSFAGLFIIIA    300
                     |:|:.:.:||||||||||.||:||..|||::||...|..:|::|:.::|.
BL00688___yjl    251 DLVKGDMRKLAAVEATQSFEVLFAAAGEILILSSPLPGAISWSGMALVII    300

BSNT_02079___    301 GMMLHTFAS--QPRKPKKKAQSNLTA    324
                     ||:|::.||  :|....|.|::    
BL00688___yjl    301 GMVLNSHASNQKPAVQSKAAKA----    322


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