Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03286 and BL00676

See DNA alignment / Visit BSNT_03286 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:57
# Commandline: needle
#    -asequence pep-align/BSNT_03286___ypbQ.1.5803.seq
#    -bsequence pep-align/BL00676___ypbQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03286___ypbQ-BL00676___ypbQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03286___ypbQ-BL00676___ypbQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03286___ypbQ
# 2: BL00676___ypbQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:      83/168 (49.4%)
# Similarity:   117/168 (69.6%)
# Gaps:           1/168 ( 0.6%)
# Score: 467.0
# 
#
#=======================================

BSNT_03286___      1 MFWLLIAILIVQRAAEMAVARQNEQKVKKQGAIEFGESHYPYIITMHILF     50
                     |||.:::|...||..|:|||:.||:...|:||:|:|:.|||||:.||:.|
BL00676___ypb      1 MFWTILSIFAAQRLLELAVAKFNEKNALKEGAVEYGKRHYPYIVAMHVSF     50

BSNT_03286___     51 FLSLIAEVLLMNKQPSSWWLGIAAVILSAQIVRYWALCSLGAYWNTKILV    100
                     |:|||.|.....:......|.:...::..|::|||||.|||..|||||||
BL00676___ypb     51 FVSLIWETTAFQRGTLPMALVVLTGLIFTQVLRYWALFSLGKCWNTKILV    100

BSNT_03286___    101 VPGVELVKKGPYKWMKHPNYAVVILEILLIPLLYQAYVTMCLFSIFNAVL    150
                     :||..||:||||:|:|||||..|.||.||:|||:|||.|..||::.||.:
BL00676___ypb    101 IPGTNLVRKGPYQWIKHPNYLAVALEFLLLPLLFQAYATALLFTVLNAAV    150

BSNT_03286___    151 LSVRIRAEDKALQEYSVK    168
                     :.:|||.|::||::... 
BL00676___ypb    151 MYIRIRTEEQALEKLHH-    167


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