Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03282 and BL00673

See DNA alignment / Visit BSNT_03282 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:57
# Commandline: needle
#    -asequence pep-align/BSNT_03282___ypbS.1.5803.seq
#    -bsequence pep-align/BL00673___ypbS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03282___ypbS-BL00673___ypbS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03282___ypbS-BL00673___ypbS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03282___ypbS
# 2: BL00673___ypbS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      60/89 (67.4%)
# Similarity:    72/89 (80.9%)
# Gaps:           4/89 ( 4.5%)
# Score: 308.0
# 
#
#=======================================

BSNT_03282___      1 MSEVHKAISAHSSKQHEHIKAFMRLENMRELAIEEVVAKCRNDEPYTTDA     50
                     |:.||:||:|||.|||:|||.|:|||..||.||::||.|||.:|.::||.
BL00673___ypb      1 MTNVHEAITAHSKKQHQHIKQFVRLEQEREKAIDDVVDKCRRNEAFSTDL     50

BSNT_03282___     51 INEITEQMNQLAKKGIVPTRRLVSKEMVREYVSRM----     85
                     ||:||.|||:||||||||||||||||||.|||||.    
BL00673___ypb     51 INQITVQMNELAKKGIVPTRRLVSKEMVAEYVSRKYPQA     89


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.