Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03282 and BL00673

See Amino acid alignment / Visit BSNT_03282 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:57
# Commandline: needle
#    -asequence dna-align/BSNT_03282___ypbS.1.5803.seq
#    -bsequence dna-align/BL00673___ypbS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03282___ypbS-BL00673___ypbS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03282___ypbS-BL00673___ypbS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03282___ypbS
# 2: BL00673___ypbS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 277
# Identity:     186/277 (67.1%)
# Similarity:   186/277 (67.1%)
# Gaps:          26/277 ( 9.4%)
# Score: 607.5
# 
#
#=======================================

BSNT_03282___      1 ATGTCAGAGGTACATAAAGCAATTTCAGCACATTCATCAAAACAGCACGA     50
                     |||.||.|.||.|||.||||.|||.|||||||||||..||||||||||.|
BL00673___ypb      1 ATGACAAACGTTCATGAAGCGATTACAGCACATTCAAAAAAACAGCACCA     50

BSNT_03282___     51 GCATATCAAAGCA-TTTATGCGTCTTGAAAATATGCGTGAATTGGCGATT     99
                     |||.||| ||||| ||..|||||||.|||.|...|.|.|||...||.||.
BL00673___ypb     51 GCACATC-AAGCAGTTCGTGCGTCTCGAACAGGAGAGGGAAAAAGCAATC     99

BSNT_03282___    100 GAAGAAGTTGTTGCTAAATGC---AGAAACGATGAGCCTTATACTACAGA    146
                     ||.||.||.||.|.|||.|||   .|.|||||  |||.|| |.|.||.||
BL00673___ypb    100 GATGATGTGGTCGATAAGTGCCGGCGTAACGA--AGCATT-TTCAACCGA    146

BSNT_03282___    147 TGCAATTAATGAAATTACCGAGCAAATGAATCAGCTCGCTAAAAAAGGCA    196
                     ....||.||..|||||||.|.|||.|||||..|..|.||.||||||||||
BL00673___ypb    147 CCTCATCAACCAAATTACAGTGCAGATGAACGAATTGGCCAAAAAAGGCA    196

BSNT_03282___    197 TCGTCCCGACAAGACGGCTTGTATCAAAAGAAATGGTCAGAGAATACGTA    246
                     ||||.||.|||||||||||.||.||.||.||||||||....||||||||.
BL00673___ypb    197 TCGTTCCCACAAGACGGCTCGTCTCGAAGGAAATGGTTGCCGAATACGTC    246

BSNT_03282___    247 AGCCGCATGTAA---------------    258
                     |||||.|   ||               
BL00673___ypb    247 AGCCGAA---AATATCCGCAGGCCTAG    270


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