Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03280 and BL00671

See DNA alignment / Visit BSNT_03280 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:57
# Commandline: needle
#    -asequence pep-align/BSNT_03280___ypcP.1.5803.seq
#    -bsequence pep-align/BL00671___ypcP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03280___ypcP-BL00671___ypcP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03280___ypcP-BL00671___ypcP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03280___ypcP
# 2: BL00671___ypcP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     224/296 (75.7%)
# Similarity:   255/296 (86.1%)
# Gaps:           1/296 ( 0.3%)
# Score: 1177.0
# 
#
#=======================================

BSNT_03280___      1 MNNNKLLLVDGMALLFRAFFATAVHRNFMINDSGVPTNGVNGFLKHLITA     50
                      .|.|||||||||||||:|||||||||||:||.|||||||:||||||:||
BL00671___ypc      1 -MNKKLLLVDGMALLFRSFFATAVHRNFMLNDKGVPTNGVHGFLKHLLTA     49

BSNT_03280___     51 VETFQPTHVVCCWDMGSKTYRNDLFQDYKANRSAPPVELIPQFDLAKEAA    100
                     ...|:|:||:|||||||||||||||:|||||||.||:|||||||:|||||
BL00671___ypc     50 ASAFEPSHVICCWDMGSKTYRNDLFKDYKANRSEPPLELIPQFDMAKEAA     99

BSNT_03280___    101 AELGIMNIGFAGYEADDCIGTLADLFANEADITVVTGDRDLLQLLTDKVS    150
                     .||||:|||.||||||||||||..:|:.|||||:||||:|||||||..|.
BL00671___ypc    100 EELGILNIGLAGYEADDCIGTLTAMFSEEADITIVTGDKDLLQLLTVNVK    149

BSNT_03280___    151 VALLQKGIGNYKVYTKETFYEETGVMPKALIDIKALMGDSSDNYPGVKGI    200
                     |||||||||||||||:|:|.||||:.|||||||||||||:||||||||||
BL00671___ypc    150 VALLQKGIGNYKVYTEESFSEETGIEPKALIDIKALMGDTSDNYPGVKGI    199

BSNT_03280___    201 GEKTAYKLIREYETIDRLLENLSLLPKGQQGKIQQGLSDLEMSRKLAEIH    250
                     |||||||||:||.|:||||||:..|.||||.||.:.|.||:|||.||||.
BL00671___ypc    200 GEKTAYKLIKEYSTVDRLLENIGQLTKGQQTKITECLEDLKMSRILAEIK    249

BSNT_03280___    251 CSVPLACTLKDALFTLQMEQAADMLRRHQIKGIERMLEKLNAREIV    296
                     |.|||:|:|.||.|||..::|.:|||.|||:|||.:|.|...|||.
BL00671___ypc    250 CDVPLSCSLDDADFTLMHDRAKEMLRLHQIRGIEPLLMKFEKREIG    295


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.