Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03276 and BL00669
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:56
# Commandline: needle
# -asequence pep-align/BSNT_03276___ypdP.1.5803.seq
# -bsequence pep-align/BL00669___ypdP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03276___ypdP-BL00669___ypdP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03276___ypdP-BL00669___ypdP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03276___ypdP
# 2: BL00669___ypdP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity: 165/233 (70.8%)
# Similarity: 193/233 (82.8%)
# Gaps: 4/233 ( 1.7%)
# Score: 874.0
#
#
#=======================================
BSNT_03276___ 1 MFNNSFWIFFAIIHFIIVLLFYKGFGKMGLFVWIGFATVCANLQVVKTVE 50
|||...||.||||:|||||.|:|.|||.||||||||||..||::||||||
BL00669___ypd 1 MFNEILWISFAIINFIIVLFFFKRFGKTGLFVWIGFATAAANIEVVKTVE 50
BSNT_03276___ 51 LFGLTATLGNVMYGTIFFATDVLNEKYGPAEARKAVWLGFSTLLTLTFVM 100
||||||||||::||::||||||:||:||..||:|||.:||..|:|||.||
BL00669___ypd 51 LFGLTATLGNILYGSVFFATDVINERYGKEEAKKAVSIGFFILITLTLVM 100
BSNT_03276___ 101 QGVLLFEPASSDISQTALETIFGFLPRVALGSLLAFIFSQTLDVYVYSAI 150
||.|||:|...||:|.|||||||||||||||||||:|.||||||||||.|
BL00669___ypd 101 QGALLFKPHPEDIAQPALETIFGFLPRVALGSLLAYIISQTLDVYVYSGI 150
BSNT_03276___ 151 RRIFPSDRLLWLRNGGSTAVSQLFDTFIFTSVAFLGIYPAGVWLHIFIST 200
||:|||||.|||||.||||:|||.||.|||||||:|.||..||:.|||:|
BL00669___ypd 151 RRLFPSDRALWLRNSGSTALSQLLDTLIFTSVAFMGAYPLDVWIQIFITT 200
BSNT_03276___ 201 YLIKFAVSLISLPYAYAAKKMIPKDERSS---- 229
|::||.|::.:.|||||||::.|.||||.
BL00669___ypd 201 YVLKFVVAVFAAPYAYAAKRITPLDERSENNAG 233
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