Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03440 and BL00658

See DNA alignment / Visit BSNT_03440 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:25
# Commandline: needle
#    -asequence pep-align/BSNT_03440___resD.1.5803.seq
#    -bsequence pep-align/BL00658___resD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03440___resD-BL00658___resD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03440___resD-BL00658___resD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03440___resD
# 2: BL00658___resD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     218/251 (86.9%)
# Similarity:   227/251 (90.4%)
# Gaps:          11/251 ( 4.4%)
# Score: 1120.0
# 
#
#=======================================

BSNT_03440___      1 MKVTEGKQGENMDQTNETKILVVDDEARIRRLLRMYLERENYAIDEAENG     50
                                |:||.|||||||||||||||||:||||||||.|:|||||
BL00658___res      1 -----------MEQTKETKILVVDDEARIRRLLKMYLERENYKIEEAENG     39

BSNT_03440___     51 DEAIAKGLEANYDLILLDLMMPGTDGIEVCRQIREKKATPIIMLTAKGEE    100
                     ||||.|.|..:|||||||||||||||||||||:|:|||||||||||||||
BL00658___res     40 DEAIDKALGNDYDLILLDLMMPGTDGIEVCRQVRDKKATPIIMLTAKGEE     89

BSNT_03440___    101 ANRVQGFEAGTDDYIVKPFSPREVVLRVKALLRRASQTSYFNANTPTKNV    150
                     ||||||||.|||||||||||||||||||||||||:|||||.|.:|..|||
BL00658___res     90 ANRVQGFEVGTDDYIVKPFSPREVVLRVKALLRRSSQTSYLNTDTTAKNV    139

BSNT_03440___    151 LVFSHLSIDHDAHRVTADGTEVSLTPKEYELLYFLAKTPDKVYDREKLLK    200
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BL00658___res    140 LVFSHLSIDHDAHRVMADGTEVSLTPKEYELLYFLAKTPDKVYDREKLLK    189

BSNT_03440___    201 EVWQYEFFGDLRTVDTHVKRLREKLNKVSPEAAKKIVTVWGVGYKFEVGA    250
                     ||||||||||||||||||||||||||||||:||||||||||||||||||.
BL00658___res    190 EVWQYEFFGDLRTVDTHVKRLREKLNKVSPKAAKKIVTVWGVGYKFEVGN    239

BSNT_03440___    251 E    251
                     |
BL00658___res    240 E    240


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.