Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03440 and BL00658
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:26
# Commandline: needle
# -asequence dna-align/BSNT_03440___resD.1.5803.seq
# -bsequence dna-align/BL00658___resD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03440___resD-BL00658___resD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03440___resD-BL00658___resD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03440___resD
# 2: BL00658___resD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 759
# Identity: 564/759 (74.3%)
# Similarity: 564/759 (74.3%)
# Gaps: 39/759 ( 5.1%)
# Score: 2155.0
#
#
#=======================================
BSNT_03440___ 1 ATGAAAGTAACAGAAGGAAAGCAGGGGGAAAACATGGACCAAACGAACGA 50
|||||.||.|||||.||
BL00658___res 1 ---------------------------------ATGGAACAGACGAAAGA 17
BSNT_03440___ 51 AACAAAAATATTAGTAGTTGATGACGAAGCCAGAATTCGCCGCCTTTTAA 100
.|||||||||||||||||.|||||.||.||.|||||..|.||.|||||||
BL00658___res 18 GACAAAAATATTAGTAGTAGATGATGAGGCAAGAATCAGACGACTTTTAA 67
BSNT_03440___ 101 GAATGTATCTTGAACGTGAAAATTATGCTATAGATGAAGCTGAAAATGGT 150
.||||||.||||||.|.|||||.||....||.||.|||||.||.|||||.
BL00658___res 68 AAATGTACCTTGAAAGGGAAAACTACAAGATCGAAGAAGCCGAGAATGGC 117
BSNT_03440___ 151 GATGAAGCCATTGCCAAAGGGCTTGAAGC--CAATTATGACTTAATTTTG 198
|||||||||||.|.|||||..||.| || |.||||.||.|||||..||
BL00658___res 118 GATGAAGCCATCGACAAAGCCCTCG--GCAACGATTACGATTTAATCCTG 165
BSNT_03440___ 199 CTTGATCTGATGATGCCGGGGACTGATGGAATTGAAGTGTGCCGGCAAAT 248
||.|||.|||||||||||||.||.||.||.||||||||.|||||.|||.|
BL00658___res 166 CTCGATTTGATGATGCCGGGAACCGACGGCATTGAAGTATGCCGCCAAGT 215
BSNT_03440___ 249 TCGTGAAAAAAAAGCGACACCCATTATTATGCTGACCGCAAAAGGAGAAG 298
.||.||.||||||||.||.||.||.||.||||||||.||.|||||.||||
BL00658___res 216 ACGCGATAAAAAAGCCACTCCGATCATCATGCTGACGGCGAAAGGCGAAG 265
BSNT_03440___ 299 AAGCAAATCGGGTGCAGGGGTTTGAAGCGGGAACAGATGATTATATTGTT 348
||||.||.|||||||||||.|||||||..|||||.|||||.||.|||||.
BL00658___res 266 AAGCGAACCGGGTGCAGGGCTTTGAAGTCGGAACCGATGACTACATTGTG 315
BSNT_03440___ 349 AAGCCGTTCAGCCCGAGAGAAGTCGTGCTGCGTGTAAAGGCCCTTTTGAG 398
||.||.|||||.|||||.|||||.||||||.|.||.|||||.||..|.||
BL00658___res 316 AAACCTTTCAGTCCGAGGGAAGTGGTGCTGAGAGTCAAGGCGCTCCTAAG 365
BSNT_03440___ 399 AAGAGCATCCCAAACCTCTTATTTCAATGCCAATACACCGACGAAAAATG 448
||||.||||.|||||||||||..|.|||.|..|||||.||.|.|||||||
BL00658___res 366 AAGATCATCGCAAACCTCTTACCTGAATACGGATACAACGGCAAAAAATG 415
BSNT_03440___ 449 TGCTCGTGTTTTCACATCTGTCAATAGACCATGATGCTCACCGCGTAACA 498
||||.||.|||||.||..|.||.||.||.||.|||||||||.|.||.|..
BL00658___res 416 TGCTTGTTTTTTCTCACTTATCCATTGATCACGATGCTCACAGAGTCATG 465
BSNT_03440___ 499 GCTGATGGAACAGAAGTGAGCCTGACGCCAAAAGAGTATGAGCTTCTATA 548
||.||.|||||.|||||.|||||||||||.|||||.||.||.||.||.||
BL00658___res 466 GCGGACGGAACGGAAGTCAGCCTGACGCCGAAAGAATACGAACTGCTTTA 515
BSNT_03440___ 549 -TTTCTTAGCGAAAACGCCTGACAAGGTGTATGATCGGGAAAAGCTTCTG 597
|||| |.||.|||||.|||||.||.||.||.|||||.||||||||.|||
BL00658___res 516 CTTTC-TGGCCAAAACTCCTGATAAAGTATACGATCGTGAAAAGCTGCTG 564
BSNT_03440___ 598 AAAGAAGTGTGGCAATATGAGTTTTTTGGTGATTTACGGACAGTGGACAC 647
||.|||||.||||||||.||||||||.||.||.||..|.||.||.||.||
BL00658___res 565 AAGGAAGTATGGCAATACGAGTTTTTCGGCGACTTGAGAACGGTCGATAC 614
BSNT_03440___ 648 TCACGTCAAACGTTTGAGAGAGAAGCTGAACAAGGTATCTCCGGAAGCTG 697
.||.||.||||||||..|.||.||..|||||||.||.||.|||.||||||
BL00658___res 615 CCATGTTAAACGTTTACGTGAAAAATTGAACAAAGTCTCGCCGAAAGCTG 664
BSNT_03440___ 698 CGAAAAAAATTGTCACAGTATGGGGTGTAGGTTATAAATTTGAGGTCGGC 747
||||||||||.||.|||||||||||.||.||.|||||||||||||||||.
BL00658___res 665 CGAAAAAAATCGTAACAGTATGGGGCGTCGGGTATAAATTTGAGGTCGGA 714
BSNT_03440___ 748 GCTGAATGA 756
...||||||
BL00658___res 715 AACGAATGA 723
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