Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03436 and BL00649

See DNA alignment / Visit BSNT_03436 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:25
# Commandline: needle
#    -asequence pep-align/BSNT_03436.1.5803.seq
#    -bsequence pep-align/BL00649___rsiX.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03436-BL00649___rsiX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03436-BL00649___rsiX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03436
# 2: BL00649___rsiX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 377
# Identity:     113/377 (30.0%)
# Similarity:   199/377 (52.8%)
# Gaps:          54/377 (14.3%)
# Score: 531.0
# 
#
#=======================================

BSNT_03436         1 -----------------------------------MAKRKNKPAVRWIGP     15
                                                        :|.::..|..| :|.
BL00649___rsi      1 MKKSEWNEERLKALLSQLPTVKDNRSANQIYQKLILAPKRKSPKKR-VGA     49

BSNT_03436        16 ACAAAIAVYIAFIISPHFFDQAQPQQK---EASQENAVTKTETEDSPKAA     62
                     ..|..:.:::..:|:|...:|.:.|..   ..|.:..:.:||.:    ||
BL00649___rsi     50 FAATVLVLFLLMLITPQLIEQIRSQNSADANISSDGKLVQTEAD----AA     95

BSNT_03436        63 SSLDHTSFVVPEKEQDNYITVAVADADTSAIIPVSIQKTNADQTIQDMLF    112
                     .|....:|||.:.::|:|||.|..|...|.::|||::|:.....::|.|.
BL00649___rsi     96 KSEPANTFVVSQNQKDDYITFAFLDESKSVVVPVSLEKSTGMTNLEDALH    145

BSNT_03436       113 ESSELGILDHAITIPT-FIDEVEIKEKPKQKELSIRVHQPATAFSVKDDT    161
                     ..|.||: |...:..| ::|:|:.||:...|:|.|:|.:.....||:|..
BL00649___rsi    146 AYSRLGV-DQFTSFDTAYLDKVKFKEQKNNKKLKIQVDEKIPELSVEDFE    194

BSNT_03436       162 LLKKLLKESLKWSPYEKVKFLSDQNETGVRIGSYGTFTEISIPKQSKRAY    211
                     .||.::.|:.||..|:.|.|:|: :::||...::|...:::|..|:::.|
BL00649___rsi    195 RLKNVINETFKWGSYDSVLFISN-DKSGVEFETFGMLADMAIMHQTQKCY    243

BSNT_03436       212 YLYKNKQG-NFLIPSEKTFDTVKEAINEMESSSQEDTT---PLIQAGT-V    256
                     |||::..| .||.||.:::::|:|||..|:  ::|..|   |::...| :
BL00649___rsi    244 YLYESSDGRRFLAPSSESYESVQEAIKMMK--NEESGTHLKPILSDDTPI    291

BSNT_03436       257 QSVTKKQKHLYIRFSKDSEVEDSIAGILMIEGLLLTAKEFGFTEVTFTET    306
                     :.:.|..|.|.|:||..:.:|:....:||:||||||||:||||:|.|...
BL00649___rsi    292 EDIQKNGKELIIQFSSSANIENKPEDVLMVEGLLLTAKDFGFTKVKFKNA    341

BSNT_03436       307 RTNKIGKYDVSDAIPVPAAPNPIFLN-    332
                     ...|:|.||:|.::.||.||||:.:. 
BL00649___rsi    342 SITKVGAYDLSKSVQVPYAPNPMTIEN    368


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