Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02934 and BL00646

See DNA alignment / Visit BSNT_02934 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:37
# Commandline: needle
#    -asequence pep-align/BSNT_02934___yndB.1.5803.seq
#    -bsequence pep-align/BL00646___yndB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02934___yndB-BL00646___yndB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02934___yndB-BL00646___yndB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02934___yndB
# 2: BL00646___yndB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 145
# Identity:      84/145 (57.9%)
# Similarity:   104/145 (71.7%)
# Gaps:           4/145 ( 2.8%)
# Score: 455.0
# 
#
#=======================================

BSNT_02934___      1 MAQNNENALPDITKSITLEAPIQKVWETVSTSEGIAKWFMPNDFQLKEGQ     50
                        .:...:|||.|.....|.|:||||.|:||||||.|||||||:.:.|.
BL00646___ynd      1 ---MSNQLVPDIHKQAVFHASIEKVWEAVATSEGIAAWFMPNDFRPEIGC     47

BSNT_02934___     51 EFHLQSPFGPSPCKVLAVQAPTELSFEWDTEGWVVTFQLEDL-GEKTGFT     99
                     ||.||||||||||||:.:.||..|:|.|||.||:|||:|::| .|||.||
BL00646___ynd     48 EFTLQSPFGPSPCKVIELDAPHRLAFSWDTSGWIVTFELKELSAEKTEFT     97

BSNT_02934___    100 LIHSGWKEPNEVIGKANEKSSVVRGKMDGGWTGIVNERLRKAVEE    144
                     ||||||..|.|.:.||.||.:.||.:|:|||..|||::||:|||.
BL00646___ynd     98 LIHSGWGAPEETVSKAGEKQADVRNRMNGGWETIVNQKLRQAVEG    142


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