Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04062 and BL00642

See DNA alignment / Visit BSNT_04062 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:07
# Commandline: needle
#    -asequence pep-align/BSNT_04062___spoIVFA.1.5803.seq
#    -bsequence pep-align/BL00642___spoIVFA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04062___spoIVFA-BL00642___spoIVFA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04062___spoIVFA-BL00642___spoIVFA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04062___spoIVFA
# 2: BL00642___spoIVFA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity:     150/265 (56.6%)
# Similarity:   197/265 (74.3%)
# Gaps:           3/265 ( 1.1%)
# Score: 795.5
# 
#
#=======================================

BSNT_04062___      1 MSHRADEIRKRLEKRRKQLSGSKR-FSTQTVSEKQKPPSWVMVTDQEKHG     49
                     |||||||||||:.::||:.:..|: ||:.......|||:|...::.||.|
BL00642___spo      1 MSHRADEIRKRMARKRKRKTPDKQPFSSDGKKRPLKPPAWTAFSEDEKGG     50

BSNT_04062___     50 TIPVYEDNMPTFNGKHPLVKTDSIILKCLLSACLVLVSAIAYKTNIGPVS     99
                     ..|..|.:....||||||||.|::|||||||||||||||||||....|.:
BL00642___spo     51 DFPPPEGSSLLINGKHPLVKADALILKCLLSACLVLVSAIAYKGQFEPAN    100

BSNT_04062___    100 QIKPAVAKTFETEFQFASASHWFETKFGNPLAFLAPEHKNKEQQIEVGKD    149
                     ||||.:::.|..|||||:..:|:|:|||:||||..|:......|:||.:|
BL00642___spo    101 QIKPVISQVFTEEFQFAALQNWYESKFGDPLAFFQPKGAKPSGQVEVNQD    150

BSNT_04062___    150 LIAPASGKVQQDFQDNGEGIKVETSSDKIDSVKEGYVVEVSKDSQTGLTV    199
                     |..||.||||:.|  :|:||||||..:.|.|:|||||:||.|:.:|||||
BL00642___spo    151 LAVPAVGKVQEKF--SGQGIKVETEDETIRSMKEGYVIEVDKNPETGLTV    198

BSNT_04062___    200 KVQHADNTYSIYGELKDVDVALYDFVDKGKKLGSIKLDDHNKGVYYFAMK    249
                     .:|||||:|:.||:||..||||||::|||.|||:|:.|.:.||:||||:|
BL00642___spo    199 VLQHADNSYTYYGQLKKADVALYDYIDKGTKLGTIEQDKNQKGIYYFAIK    248

BSNT_04062___    250 DGDKFIDPIQVITFE    264
                     .|::|:|||||||||
BL00642___spo    249 QGEEFVDPIQVITFE    263


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