Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04065 and BL00639

See DNA alignment / Visit BSNT_04065 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:07
# Commandline: needle
#    -asequence pep-align/BSNT_04065___mreD.1.5803.seq
#    -bsequence pep-align/BL00639___mreD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04065___mreD-BL00639___mreD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04065___mreD-BL00639___mreD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04065___mreD
# 2: BL00639___mreD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity:     110/172 (64.0%)
# Similarity:   139/172 (80.8%)
# Gaps:           0/172 ( 0.0%)
# Score: 594.0
# 
#
#=======================================

BSNT_04065___      1 MKRFLLPFVMMLVFSAESIFTDLVHFPFVTDDQVLAPRFLMLVLIFMSAF     50
                     |||||||.|||.|..::|::.|.|:.||||::|.|.||||:|||:||:|:
BL00639___mre      1 MKRFLLPVVMMFVLVSDSVYADFVNLPFVTEEQQLIPRFLLLVLVFMTAY     50

BSNT_04065___     51 INQKHAMIYGFIFGFLYDMNYTSLLGVYMFGFAGLCYLASKAFKVLHTNA    100
                     :||..|:.||||||.|||:|||.|||||||||||:|||:|||||||.|||
BL00639___mre     51 VNQPFAITYGFIFGLLYDINYTDLLGVYMFGFAGICYLSSKAFKVLQTNA    100

BSNT_04065___    101 FVVILIAVLAVCLLEFYVFGIQSLIHKDIMTFNGFVLDRFIPTILLNIAA    150
                     .|||.|::||||:||||.:|:|.||..:||.|:.|||.|.:||:.||...
BL00639___mre    101 LVVIFISLLAVCVLEFYQYGVQMLIRPEIMPFHQFVLGRLLPTLALNAVG    150

BSNT_04065___    151 ALILVLPFRLFFMSLKKELRDE    172
                     .|:|:.||:.||.|||||||:|
BL00639___mre    151 GLLLIYPFKWFFTSLKKELRNE    172


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.