Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04068 and BL00638

See DNA alignment / Visit BSNT_04068 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:07
# Commandline: needle
#    -asequence pep-align/BSNT_04068___mreC.1.5803.seq
#    -bsequence pep-align/BL00638___mreC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04068___mreC-BL00638___mreC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04068___mreC-BL00638___mreC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04068___mreC
# 2: BL00638___mreC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity:     218/302 (72.2%)
# Similarity:   248/302 (82.1%)
# Gaps:          12/302 ( 4.0%)
# Score: 1085.0
# 
#
#=======================================

BSNT_04068___      1 MP----NKRLMLLLLCIIILVAMIGFSLKGGRNTTWPEKVIGDTTGVFQN     46
                     ||    |||||||||||||||||||||||..||.|||||.|||||||||.
BL00638___mre      1 MPQFFTNKRLMLLLLCIIILVAMIGFSLKNDRNATWPEKFIGDTTGVFQT     50

BSNT_04068___     47 IFHTPAEFFAGIFENINDLKNTYKENERLREKLDGQTQYEAKLQELEEEN     96
                     ||||||:||||.||||.||||||.||||||:||||||||||||||||.||
BL00638___mre     51 IFHTPAQFFAGFFENIEDLKNTYSENERLRKKLDGQTQYEAKLQELENEN    100

BSNT_04068___     97 KSLRDELGHVKSIKDYKPILATVIARSPD--NWAKQVTINKGTQQNVAKD    144
                     ||||.||||:||||||.|||||||||:||  .|...:|||||::..|.||
BL00638___mre    101 KSLRKELGHLKSIKDYTPILATVIARNPDKYEWWNLITINKGSKHGVEKD    150

BSNT_04068___    145 MAVTNEKGALIGKIKSSGLNNFTSTVQLLSDTDRNNRVATKISGKKGSKG    194
                     ||||:|.|.|||||||:.:|||||||||||.||||||::|.|:..||.|.
BL00638___mre    151 MAVTDENGNLIGKIKSTKVNNFTSTVQLLSATDRNNRISTVIAADKGKKT    200

BSNT_04068___    195 Y-GLIEGYDKEKKRLKMTIIERKDKQDVKKGDLIETSGTGGVFPEGLTIG    243
                     . |:|.|||.:||.|.|.|||..:.::||||||:||||.|||||:|||||
BL00638___mre    201 VNGIINGYDSDKKALSMEIIEPDEDREVKKGDLVETSGAGGVFPKGLTIG    250

BSNT_04068___    244 EVTDIESDSYGLTKVAYVKPAADLTDLNNVIVVNR-----DVPTVDTEEE    288
                     :||::|.|||||||:|||:||||:.:|:|||||:|     ||..:|.|||
BL00638___mre    251 KVTEVEPDSYGLTKIAYVEPAADMYNLDNVIVVDRTLDTVDVDKMDDEEE    300

BSNT_04068___    289 GS    290
                     ||
BL00638___mre    301 GS    302


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