Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04084 and BL00630

See DNA alignment / Visit BSNT_04084 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:08
# Commandline: needle
#    -asequence pep-align/BSNT_04084___ysxE.1.5803.seq
#    -bsequence pep-align/BL00630___ysxE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04084___ysxE-BL00630___ysxE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04084___ysxE-BL00630___ysxE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04084___ysxE
# 2: BL00630___ysxE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 343
# Identity:     206/343 (60.1%)
# Similarity:   254/343 (74.1%)
# Gaps:           5/343 ( 1.5%)
# Score: 1119.0
# 
#
#=======================================

BSNT_04084___      1 MEDTQSVLQEYGLTAQFIEPVSPLVWKVYTDYGIFALKKLKEGRGKHFTD     50
                     ||..||||.|||||.:::|.||..|||||||:|:||||||...|...||:
BL00630___ysx      1 MEGIQSVLNEYGLTPEYMESVSSKVWKVYTDHGVFALKKLAASRNTRFTE     50

BSNT_04084___     51 HMVAIEEKGFRSFVPVYRTNSGEFFSAGIQYG-DTYYLMPWLQFDQEEER     99
                     .|:.:||||:|.||||||..:|||.:   |.| |..||||||..::||||
BL00630___ysx     51 QMIMLEEKGYRQFVPVYRNRTGEFLT---QAGEDVCYLMPWLTLEREEER     97

BSNT_04084___    100 DQKHAYLFRETARLHERTAQELKVRRDEIERYYGQTKKKWEQDKIFYEQF    149
                     ||||.|:|:|.|.||:||.:||.|||:||..:|.:||:||||.|..||.|
BL00630___ysx     98 DQKHEYMFKEIALLHQRTEKELGVRREEILGHYERTKRKWEQQKQKYEAF    147

BSNT_04084___    150 VDRAEKEWYLSPFELQAITYFSETISAVNFALERLEDWYESAKEKDVSRV    199
                     :.:||.|||:|||:|||..||.|||||.:|||.|||||:|:.:||:.:|:
BL00630___ysx    148 IMKAENEWYMSPFQLQAAMYFKETISAADFALARLEDWHEAMREKESARM    197

BSNT_04084___    200 VMNHGSLSIHHFLYNDAGTGYFTNFERASVGPPQNDLLGFYTKMFRGFPK    249
                     |:|||.||:.||||||.|||||||||:|...||.|||:.|:|:||:..|.
BL00630___ysx    198 VLNHGHLSVRHFLYNDTGTGYFTNFEKAGHAPPANDLIVFFTRMFKTNPV    247

BSNT_04084___    250 ACPECVEWFYGYTKSFPLREAEVSLFLSYMAYPAAMYKVLNGYQTGKRQH    299
                     .|.|||.|||.|...:||||.|:.|||||||||..::.|||.|:..|...
BL00630___ysx    248 MCTECVNWFYTYHNVYPLREEEIGLFLSYMAYPGPVFGVLNRYEHEKGLG    297

BSNT_04084___    300 EKEECTQLLKAYWQMKNIEPFVMKIHQIEQEKKFQAENESTS-    341
                     |||.||:||||||||||.||.||.||:.|:.:|.|.|.||.| 
BL00630___ysx    298 EKEACTRLLKAYWQMKNAEPLVMSIHETEENRKLQEETESPSS    340


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