Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04089 and BL00626

See DNA alignment / Visit BSNT_04089 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:09
# Commandline: needle
#    -asequence pep-align/BSNT_04089___hemD.1.5803.seq
#    -bsequence pep-align/BL00626___hemD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04089___hemD-BL00626___hemD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04089___hemD-BL00626___hemD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04089___hemD
# 2: BL00626___hemD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity:     165/265 (62.3%)
# Similarity:   201/265 (75.8%)
# Gaps:           5/265 ( 1.9%)
# Score: 788.0
# 
#
#=======================================

BSNT_04089___      1 MENDFPLKGKTVLVTRNKAQATSFQQKVEALGGKAVLTSLITFRRALPND     50
                     |::|.||:||.||||||||||.||::|||||||:|||||||:||.|||.:
BL00626___hem      1 MKHDLPLEGKKVLVTRNKAQAQSFREKVEALGGEAVLTSLISFRPALPPE     50

BSNT_04089___     51 VAEQVREDLAAPGWLVFTSVNGADFFFSYLKENQLI-LPAHK-KIAAVGE     98
                     .|.:.|.||.:..||||||||||.|||||||:..|. .||.| |:|||||
BL00626___hem     51 QARRFRADLESADWLVFTSVNGAKFFFSYLKDAGLCDPPASKAKVAAVGE    100

BSNT_04089___     99 KTARRLQTHNVSVDVMPQEYIAEQLADALKQHAEPGEPITVMKGNLSRDV    148
                     ||||.|:...:|||:||:.|:||.||:||||:|...:.:.|:||||||||
BL00626___hem    101 KTARYLRDRGLSVDLMPELYVAEHLAEALKQNAGRHDKVVVLKGNLSRDV    150

BSNT_04089___    149 IKQELVPLGFEVKEWVLYETIPDEEGIEALKDAAGQYSFDYVTFTSSSTV    198
                     ||:.:.|||.:|.||:||||:.||.||..||:||...|||:|||||||||
BL00626___hem    151 IKKTISPLGIQVSEWILYETVRDERGILDLKEAAKHASFDFVTFTSSSTV    200

BSNT_04089___    199 HTFMHVLGEELKKW-KANGTACISIGPLTNDALLTYGITSHTPDTFTIDG    247
                     ||||.:|.||...| :.|.||.|:|||||..||..|||.|:.||.:||||
BL00626___hem    201 HTFMSILKEESLAWAEKNRTAFITIGPLTKKALSDYGIPSYMPDVYTIDG    250

BSNT_04089___    248 MLGLMCSMSREEERI    262
                     ||..||.:||:.|  
BL00626___hem    251 MLREMCRISRKGE--    263


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