Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04099 and BL00620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:10
# Commandline: needle
# -asequence pep-align/BSNT_04099___lonB.1.5803.seq
# -bsequence pep-align/BL00620___lonB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04099___lonB-BL00620___lonB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04099___lonB-BL00620___lonB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04099___lonB
# 2: BL00620___lonB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 552
# Identity: 476/552 (86.2%)
# Similarity: 519/552 (94.0%)
# Gaps: 1/552 ( 0.2%)
# Score: 2464.0
#
#
#=======================================
BSNT_04099___ 1 MSWTGIALFIQLFFGIIIGLYFWNLLKNQRTQKVTIDKESKKEMEQLRKM 50
||||.||||:|||||||||||||||||||||||||||:||||||||||||
BL00620___lon 1 MSWTSIALFVQLFFGIIIGLYFWNLLKNQRTQKVTIDRESKKEMEQLRKM 50
BSNT_04099___ 51 RAISLSEPLSEKVRPKSFKDIVGQEDGIKALKAALCGPNPQHVIVYGPPG 100
|:|.|||||||||||.:|||||||||||||||||||||||||||:|||||
BL00620___lon 51 RSIHLSEPLSEKVRPTAFKDIVGQEDGIKALKAALCGPNPQHVIIYGPPG 100
BSNT_04099___ 101 VGKTAAARLVLEEAKKHKQSPFKEQAVFVELDATTARFDERGIADPLIGS 150
||||||||||||||||:|:|||:|.:.|||||||||||||||||||||||
BL00620___lon 101 VGKTAAARLVLEEAKKNKRSPFQEHSAFVELDATTARFDERGIADPLIGS 150
BSNT_04099___ 151 VHDPIYQGAGAMGQAGIPQPKQGAVTHAHGGVLFIDEIGELHPIQMNKML 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BL00620___lon 151 VHDPIYQGAGAMGQAGIPQPKQGAVTHAHGGVLFIDEIGELHPIQMNKML 200
BSNT_04099___ 201 KVLEDRKVFLDSAYYSEENTQIPNHIHDIFQNGLPADFRLIGATTRMPNE 250
||||||||||:||||||||||||.||||||||||||||||||||||||:|
BL00620___lon 201 KVLEDRKVFLESAYYSEENTQIPKHIHDIFQNGLPADFRLIGATTRMPDE 250
BSNT_04099___ 251 IPPAIRSRCLEVFFRELEKDELKTVAKTAADKIEKNISEEGLDLLTSYTR 300
|||||||||||||||:|||.|||||||.|||||:|.::||||||||.|.|
BL00620___lon 251 IPPAIRSRCLEVFFRDLEKHELKTVAKKAADKIQKKVAEEGLDLLTRYAR 300
BSNT_04099___ 301 NGREAVNMIQIAAGMAVTENRKDITIEDIEWVIHSSQLTPKHEQKIGVEP 350
||||.|||:|||||||:||.|.::|:|||||||||||||||:||||..:|
BL00620___lon 301 NGREVVNMMQIAAGMALTEERDEVTVEDIEWVIHSSQLTPKYEQKIASKP 350
BSNT_04099___ 351 QVGIVNGLAVYGPNSGSLLEIEVSVTAAQDKGSINITGIAEEESIGSQSK 400
||||||||||:||||||||||||:|..|.||||||||||||||:||:|||
BL00620___lon 351 QVGIVNGLAVHGPNSGSLLEIEVTVNQAADKGSINITGIAEEENIGNQSK 400
BSNT_04099___ 401 SIRRKSMAKGSVENVLTVLRTMGMKPSDYDIHINFPGGIPIDGPSAGIAM 450
|||||||||||||||:|||||||:|.||||||:|||||||:|||||||||
BL00620___lon 401 SIRRKSMAKGSVENVMTVLRTMGVKASDYDIHVNFPGGIPVDGPSAGIAM 450
BSNT_04099___ 451 AAGIFSAIHKIPIDNTVAMTGEISLNGLVKPIGGVIPKIKAAKQSGAKKV 500
||||||||||||||:||||||||||||.|||||||||||||||.:|||.|
BL00620___lon 451 AAGIFSAIHKIPIDHTVAMTGEISLNGRVKPIGGVIPKIKAAKHAGAKTV 500
BSNT_04099___ 501 IIPYENQQAILKQIDGIEIIAVKTFQEVLDEILVNPPTEQKPFHIEINKE 550
|||:||.|:|||:|:||.|:.|||.|||||.:|||||:|. |..:::.:|
BL00620___lon 501 IIPHENVQSILKRIEGIHIVPVKTLQEVLDLVLVNPPSEM-PDGVQMKRE 549
BSNT_04099___ 551 SV 552
||
BL00620___lon 550 SV 551
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