Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04099 and BL00620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:10
# Commandline: needle
# -asequence dna-align/BSNT_04099___lonB.1.5803.seq
# -bsequence dna-align/BL00620___lonB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04099___lonB-BL00620___lonB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04099___lonB-BL00620___lonB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04099___lonB
# 2: BL00620___lonB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1677
# Identity: 1264/1677 (75.4%)
# Similarity: 1264/1677 (75.4%)
# Gaps: 39/1677 ( 2.3%)
# Score: 4681.0
#
#
#=======================================
BSNT_04099___ 1 ATGAGTTGGACAGGGATCGCGTTATTTATTCAGCTGTTTTTTGGGATCAT 50
.||||.|||||..|.||.||..|.|||.|.||.||.|||||.||||||||
BL00620___lon 1 TTGAGCTGGACGAGCATTGCACTTTTTGTACAACTATTTTTCGGGATCAT 50
BSNT_04099___ 51 CATCGGTTTGTATTTTTGGAATTTGCTTAAAAATCAAAGGACACAAAAGG 100
||||||.||.|||||||||||||||||.|||||||||||.||.|||||||
BL00620___lon 51 CATCGGATTATATTTTTGGAATTTGCTCAAAAATCAAAGAACCCAAAAGG 100
BSNT_04099___ 101 TCACGATAGATAAAGAATCAAAGAAGGAAATGGAGCAGCTTCGGAAAATG 150
|.||||||||.|.|||.||.||.||.||.|||||.|||||.|||||||||
BL00620___lon 101 TTACGATAGACAGAGAGTCCAAAAAAGAGATGGAACAGCTCCGGAAAATG 150
BSNT_04099___ 151 CGTGCTATCAGCTTGTCCGAGCCATTATCTGAGAAGGT----CCGCCCCA 196
.|..|.|||...||.||.||.||.|||||.||.||||| |||
BL00620___lon 151 AGATCAATCCATTTATCAGAACCTTTATCGGAAAAGGTGAGGCCG----- 195
BSNT_04099___ 197 AAAGC-TTTAAAGATATCGTCGGACAGGAAGACGGCATTAAAGC-ATTAA 244
|..|| ||||||||.||||||||.|||||.|||||||||||||| .|.||
BL00620___lon 196 ACGGCTTTTAAAGACATCGTCGGCCAGGAGGACGGCATTAAAGCGCTGAA 245
BSNT_04099___ 245 AGGCGGCTTTATGCGGGCCAAATCCTCAGCATGTGATTGTCTATGGGCCA 294
||.||.|.|| |||||.||.|||||.||||||||.|||.|.||.||.||.
BL00620___lon 246 AGCCGCCCTT-TGCGGACCGAATCCGCAGCATGTCATTATTTACGGCCCT 294
BSNT_04099___ 295 CCGGGAGTTGGGAAAACGGCTGCTGCGCGGCTTGTGTTGGAAGAAGCAAA 344
||.||.||.||.||||||||.|||||..|||||||..|.||||||||.||
BL00620___lon 295 CCAGGTGTGGGAAAAACGGCAGCTGCAAGGCTTGTCCTTGAAGAAGCGAA 344
BSNT_04099___ 345 AAAACATAAACAA----TCACCGTTTAAAGAGCAGGCTGTCTTTGTGGAA 390
||| .||||| ||||||||..|.||.||..|.|.||||||.||.
BL00620___lon 345 AAA----GAACAAGCGCTCACCGTTCCAGGAACATTCCGCCTTTGTCGAG 390
BSNT_04099___ 391 CTCGATGCGACAACAGCCCGTTTTGATGAAAGAGGAATTGCCGATCCGCT 440
||.||.||||||||.||||||||.||.||..|.|||||.|||||.|||.|
BL00620___lon 391 CTTGACGCGACAACGGCCCGTTTCGACGAGCGGGGAATCGCCGACCCGTT 440
BSNT_04099___ 441 CATCGGCTCTGTCCATGACCCGATATATCAAGGGGCCGGAGCGATGGGAC 490
.|||||.||.|||||.||.|||||.|||||.||.||||||||||||||.|
BL00620___lon 441 GATCGGTTCGGTCCACGATCCGATTTATCAGGGCGCCGGAGCGATGGGGC 490
BSNT_04099___ 491 AGGCTGGGATTCCGCAGCCGAAGCAGGGAGCTGTCACCCATGCCCATGGC 540
||||.||.|||||.|||||.|||||||||||.|||||.|||||.||.||.
BL00620___lon 491 AGGCCGGAATTCCCCAGCCAAAGCAGGGAGCCGTCACGCATGCACACGGT 540
BSNT_04099___ 541 GGTGTGCTGTTTATTGATGAAATAGGGGAGCTGCATCCTATTCAAATGAA 590
||.||..|.||.||.||||||||.||.|||||.|||||.|||||||||||
BL00620___lon 541 GGAGTATTATTCATCGATGAAATCGGAGAGCTTCATCCGATTCAAATGAA 590
BSNT_04099___ 591 TAAAATGCTGAAGGTGCTTGAGGACAGAAAAGTCTTTTTAGACAGTGCGT 640
||||||||||||||||||.||.||..|.|||||.|||||.||.||.||.|
BL00620___lon 591 TAAAATGCTGAAGGTGCTCGAAGATCGGAAAGTTTTTTTGGAAAGCGCCT 640
BSNT_04099___ 641 ATTACAGTGAGGAAAATACACAAATTCCGAATCATATTCATGATATTTTT 690
||||||||||.|||||.||.|||||.||.||.||||||||.||.||||||
BL00620___lon 641 ATTACAGTGAAGAAAACACGCAAATCCCCAAGCATATTCACGACATTTTT 690
BSNT_04099___ 691 CAAAATGGGCTGCCGGCTGATTTTCGCTTGATTGGCGCGACCACGAGAAT 740
|||||.|||||||||||.|||||..|..||||.||||||||.||.||.||
BL00620___lon 691 CAAAACGGGCTGCCGGCGGATTTCAGACTGATCGGCGCGACGACAAGGAT 740
BSNT_04099___ 741 GCCAAACGAAATTCCGCCAGCTATCAGGTCCCGCTGTCTGGAGGTTTTTT 790
|||..|.|||||.|||||.||.||..||||..|.|||.||||.||.||.|
BL00620___lon 741 GCCTGATGAAATCCCGCCTGCCATTCGGTCGAGATGTTTGGAAGTGTTCT 790
BSNT_04099___ 791 TCCGCGAGCTTGAAAAGGACGAGCTGAAAACTGTTGCCAAAACAGCAGCG 840
|||||||.|||||||||.||||..|.|||||.||.|||||||.|||.||.
BL00620___lon 791 TCCGCGACCTTGAAAAGCACGAATTAAAAACGGTCGCCAAAAAAGCGGCA 840
BSNT_04099___ 841 GATAAAATTGAAAAAAATATCTCCGAAGAAGGCCTAGATCTTTTGACCAG 890
|||||.|||.||||.||..||.|.||.|||||.||.||.||.|||||..|
BL00620___lon 841 GATAAGATTCAAAAGAAAGTCGCAGAGGAAGGACTCGACCTGTTGACGCG 890
BSNT_04099___ 891 CTACACACGGAACGGGCGGGAAGCCGTCAATATGATTCAAATCGCAGCGG 940
.||..|..|.|||||.||.||||.||||||||||||.||||||||.||.|
BL00620___lon 891 GTATGCGAGAAACGGCCGCGAAGTCGTCAATATGATGCAAATCGCCGCCG 940
BSNT_04099___ 941 GGATGGCTGTAACGGAGAATCGGAAGGACATTACGATTGAGGATATTGAA 990
|.||||||.|.||.||..|.||..|.||..|.|||.||||.|||||.|||
BL00620___lon 941 GAATGGCTTTGACTGAAGAGCGCGACGAGGTGACGGTTGAAGATATCGAA 990
BSNT_04099___ 991 TGGGTCATTCACTCCAGTCAGCTTACTCCAAAGCACGAGCAAAAAATCGG 1040
|||||.||.||.||.||.|||||.||.||.||..||||.||||||||||.
BL00620___lon 991 TGGGTGATCCATTCGAGCCAGCTGACACCGAAATACGAACAAAAAATCGC 1040
BSNT_04099___ 1041 TGTTGAACCACAGGTTGGCATTGTAAATGGGCTTGCAGTCTATGGGCCTA 1090
...|.||||.|||||.|||||.||.||.||.|||||.|||.|.|||||||
BL00620___lon 1041 CTCTAAACCGCAGGTCGGCATCGTCAACGGACTTGCCGTCCACGGGCCTA 1090
BSNT_04099___ 1091 ACAGCGGATCGCTTCTGGAAATCGAAGTGAGTGT-AACC--GCGGCTCAA 1137
|||||||.|||||.||.|||||.||.||.|..|| ||.| ||||||
BL00620___lon 1091 ACAGCGGTTCGCTGCTCGAAATTGAGGTCACAGTCAATCAGGCGGCT--- 1137
BSNT_04099___ 1138 GATAAAGGATCAATTAACATCACAGGAATAGCTGAAGAAGAAAGCATCGG 1187
|||||||||||.|||||.||||||||.||.||.||||||||.|..|||||
BL00620___lon 1138 GATAAAGGATCGATTAATATCACAGGCATTGCAGAAGAAGAGAATATCGG 1187
BSNT_04099___ 1188 CAGCCAATCAAAATCAATCAGACGAAAAAGCATGGCGAAGGGTTCGGTTG 1237
||.|||.||||||||.|||.|.||.||||||||||||||.||.|||||.|
BL00620___lon 1188 CAACCAGTCAAAATCGATCCGCCGGAAAAGCATGGCGAAAGGATCGGTCG 1237
BSNT_04099___ 1238 AAAATGTATTAACCGTGCTCCGGACAATGGGAATGAAGCCTTCTGATTAT 1287
||||.||..|.||.||..|.||||||||||||.|.||..||||.||||||
BL00620___lon 1238 AAAACGTCATGACTGTATTGCGGACAATGGGAGTCAAAGCTTCGGATTAT 1287
BSNT_04099___ 1288 GATATTCACATCAATTTCCCAGGAGGGATTCCGATTGATGGGCCGTCAGC 1337
|||||||||.|.||||||||.||.||.||.|||.||||.||.||.||.||
BL00620___lon 1288 GATATTCACGTGAATTTCCCCGGCGGTATCCCGGTTGACGGACCATCTGC 1337
BSNT_04099___ 1338 AGGCATTGCGATGGCGGCGGGGATTTTCTCGGCGATACACAAAATTCCTA 1387
|||.|||||.|||||||||||.||.|||||.||.||.||.||.|||||.|
BL00620___lon 1338 AGGGATTGCAATGGCGGCGGGCATATTCTCCGCTATTCATAAGATTCCGA 1387
BSNT_04099___ 1388 TTGACAATACCGTTGCGATGACGGGCGAAATCAGCCTGAATGGTCTTGTG 1437
|.|||.||||.||.||.||||||||.||||||||||||||.||.|..||.
BL00620___lon 1388 TAGACCATACTGTCGCCATGACGGGTGAAATCAGCCTGAACGGCCGGGTA 1437
BSNT_04099___ 1438 AAACCCATTGGAGGCGTCATTCCGAAAATAAAAGCGGCCAAGCAGTCCGG 1487
||.||.||.||.|||||.|||||||||||.||||||||||||||..|.||
BL00620___lon 1438 AAGCCGATCGGCGGCGTGATTCCGAAAATCAAAGCGGCCAAGCATGCGGG 1487
BSNT_04099___ 1488 GGCGAAAAAGGTGATTATCCCATATGAAAATCAGCAGGCCATCTTAAAGC 1537
|||.||||..||.|||||.||..|.||||||...|||.|.||.|||||||
BL00620___lon 1488 GGCAAAAACAGTCATTATTCCGCACGAAAATGTTCAGTCGATTTTAAAGC 1537
BSNT_04099___ 1538 AGATTGACGGGATCGAGATTATTGCAGTGAAGACGTTCCAAGAAGTGCTT 1587
.|||.||.||.||..|.||..||.|.||.||.||.||.||.|||||.||.
BL00620___lon 1538 GGATAGAAGGCATACATATCGTTCCCGTCAAAACCTTGCAGGAAGTACTC 1587
BSNT_04099___ 1588 GATGAAATTTTGGTGAATCCGCCAACGGAACAAAAACCG-----TTTCAT 1632
||.....|.|||||.||.||.||..|.|| ||...||| .|||
BL00620___lon 1588 GACCTCGTATTGGTCAACCCTCCTTCAGA--AATGCCCGACGGCGTTC-- 1633
BSNT_04099___ 1633 ATCGAAATCAATAAAGAATCTGTTTAA 1659
||||.||.|.||||||.||||||
BL00620___lon 1634 ----AAATGAAAAGAGAATCCGTTTAA 1656
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