Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01133 and BL00589
See
DNA alignment /
Visit
BSNT_01133 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:39
# Commandline: needle
# -asequence pep-align/BSNT_01133___ligA.1.5803.seq
# -bsequence pep-align/BL00589___ligA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01133___ligA-BL00589___ligA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01133___ligA-BL00589___ligA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01133___ligA
# 2: BL00589___ligA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 668
# Identity: 568/668 (85.0%)
# Similarity: 629/668 (94.2%)
# Gaps: 1/668 ( 0.1%)
# Score: 2928.0
#
#
#=======================================
BSNT_01133___ 1 MDKETAKQRAEELRRTINKYSYEYYTLDEPSVPDAEYDRLMQELIAIEEE 50
|:||.||:|.|:|...||||:|||:|||:|||||:|||:||:||||:|||
BL00589___lig 1 MEKEAAKRRVEQLHALINKYNYEYHTLDDPSVPDSEYDKLMKELIALEEE 50
BSNT_01133___ 51 HPDLRTPDSPTQRVGGAVLEAFQKVTHGTPMLSLGNAFNADDLRDFDRRV 100
||||:|||||:||||||||:|||||.|.|||||||||||.:|||||||||
BL00589___lig 51 HPDLKTPDSPSQRVGGAVLDAFQKVQHKTPMLSLGNAFNEEDLRDFDRRV 100
BSNT_01133___ 101 RQAVGDDVAYNVELKIDGLAVSLRYEDGYFVRGATRGDGTTGEDITENLK 150
||||| ||.||||.||||||||||||:|.|||||||||||||||||||||
BL00589___lig 101 RQAVG-DVEYNVEFKIDGLAVSLRYENGVFVRGATRGDGTTGEDITENLK 149
BSNT_01133___ 151 TIRNIPLKMNRELSIEVRGEAYMPKRSFEALNEERIKNEEEPFANPRNAA 200
|||||||:|.|:|||||||||:|||||||.||:.||:.:|||||||||||
BL00589___lig 150 TIRNIPLRMKRDLSIEVRGEAFMPKRSFELLNKARIERDEEPFANPRNAA 199
BSNT_01133___ 201 AGSLRQLDPKIAAKRNLDIFVYSIAELDEMGVETQSQGLDFLDELGFKTN 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BL00589___lig 200 AGSLRQLDPKIAAKRNLDIFVYSIAELDEMGVETQSQGLDFLDELGFKTN 249
BSNT_01133___ 251 QERKKCGDIEEVITLIDELQAKRADLPYEIDGIVIKVDSLDQQEELGFTA 300
.|||||..|||||.:::||:.|||||||||||||||||||||||||||||
BL00589___lig 250 HERKKCSTIEEVIEIVEELKTKRADLPYEIDGIVIKVDSLDQQEELGFTA 299
BSNT_01133___ 301 KSPRWAIAYKFPAEEVVTKLLDIELNVGRTGVITPTAILEPVKVAGTTVS 350
||||||||||||||||||.||||||:|||||.:||||||||||||||||.
BL00589___lig 300 KSPRWAIAYKFPAEEVVTTLLDIELSVGRTGAVTPTAILEPVKVAGTTVQ 349
BSNT_01133___ 351 RASLHNEDLIKEKDIRILDKVVVKKAGDIIPEVVNVLVEQRTGEEKEFSM 400
||||||||||||||||:||||||||||||||||||||||||||:||||:|
BL00589___lig 350 RASLHNEDLIKEKDIRLLDKVVVKKAGDIIPEVVNVLVEQRTGKEKEFNM 399
BSNT_01133___ 401 PTECPECGSELVRIEGEVALRCINPECPAQIREGLIHFVSRNAMNIDGLG 450
|.||||||||||||||||||||||||||||||||||||||||||||||||
BL00589___lig 400 PKECPECGSELVRIEGEVALRCINPECPAQIREGLIHFVSRNAMNIDGLG 449
BSNT_01133___ 451 ERVITQLFEENLVRNVADLYKLTKERVIQLERMGEKSTENLISSIQKSKE 500
||||||||.|:||.|||||||||:|::|.|||||||||:||::||:|||:
BL00589___lig 450 ERVITQLFREDLVHNVADLYKLTREQLINLERMGEKSTDNLLNSIEKSKK 499
BSNT_01133___ 501 NSLERLLFGLGIRFIGSKAAKTLAMHFESLENLKKASKEELLAVDEIGEK 550
||||||||||||||||:|||||||||||:|:.||||:||||:.|||||:|
BL00589___lig 500 NSLERLLFGLGIRFIGAKAAKTLAMHFETLDKLKKATKEELIEVDEIGDK 549
BSNT_01133___ 551 MADAVITYFHKEEMLELLNELQELGVNTLYKGPKKVKAEDSDSYFAGKTI 600
||||::|||.|||:|:||:||:||||||:||||||..||.||||||||||
BL00589___lig 550 MADALVTYFEKEEILKLLDELEELGVNTVYKGPKKAAAEASDSYFAGKTI 599
BSNT_01133___ 601 VLTGKLEELSRNEAKAQIEALGGKLTGSVSKNTDLVIAGEAAGSKLTKAQ 650
||||||.|:|||:|||:|||||||:||||||.||||||||||||||.||:
BL00589___lig 600 VLTGKLSEMSRNDAKAEIEALGGKITGSVSKKTDLVIAGEAAGSKLAKAE 649
BSNT_01133___ 651 ELNIEVWNEEQLMGELKK 668
:||||||:|.:|:.||||
BL00589___lig 650 DLNIEVWDEARLISELKK 667
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.