Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01131 and BL00587
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:39
# Commandline: needle
# -asequence pep-align/BSNT_01131___pcrB.1.5803.seq
# -bsequence pep-align/BL00587___pcrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01131___pcrB-BL00587___pcrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01131___pcrB-BL00587___pcrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01131___pcrB
# 2: BL00587___pcrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 180/229 (78.6%)
# Similarity: 206/229 (90.0%)
# Gaps: 2/229 ( 0.9%)
# Score: 948.0
#
#
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BSNT_01131___ 1 MYDVTEWKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTEDNVLR 50
|||:||||||||||||||:.|:|||.|||||||||:|||||.||||:|||
BL00587___pcr 1 MYDITEWKHVFKLDPNKDITDDQLEQLCESGTDAVLIGGSDHVTEDDVLR 50
BSNT_01131___ 51 MMSKVRRFLVPCVLEVSAIEAIVPGFDLYFIPSVLNSKNADWIVGMHQKA 100
:||||||||||||||||.|:||||||||||||:||||::.|||.|:|:||
BL00587___pcr 51 LMSKVRRFLVPCVLEVSTIDAIVPGFDLYFIPTVLNSRDTDWIAGLHKKA 100
BSNT_01131___ 101 MKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSE 150
|||||||||.||||.|||||.|.||||||||.||.:|:::||.|||||:|
BL00587___pcr 101 MKEYGELMSPEEIVVEGYCILNQDCKAAALTNADTELDIEDIKAYARVAE 150
BSNT_01131___ 151 -LLQLPIFYLEYSGMLGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA 199
|.:||:|||||||||||.|.||:|||||:.:||||||||||||||.:.|
BL00587___pcr 151 HLFRLPVFYLEYSGMLGDSETVKETKAVLQETTLFYGGGIKDAETAVKMA 200
BSNT_01131___ 200 EHADVIVVGNAVYEDFDRALKTVAAVKGE 228
|||||||||||:||:|:.|||||.||||
BL00587___pcr 201 EHADVIVVGNAIYENFEEALKTVQAVKG- 228
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