Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01131 and BL00587
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:39
# Commandline: needle
# -asequence dna-align/BSNT_01131___pcrB.1.5803.seq
# -bsequence dna-align/BL00587___pcrB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01131___pcrB-BL00587___pcrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01131___pcrB-BL00587___pcrB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01131___pcrB
# 2: BL00587___pcrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 709
# Identity: 499/709 (70.4%)
# Similarity: 499/709 (70.4%)
# Gaps: 44/709 ( 6.2%)
# Score: 1678.0
#
#
#=======================================
BSNT_01131___ 1 GTGTACGATGTAACAGAGTGGAAGCATGTCTTTAAACTCGATCCAAATAA 50
.||||||||.|.||.|||||||||||.|||||||||||||||||.|||||
BL00587___pcr 1 ATGTACGATATTACCGAGTGGAAGCACGTCTTTAAACTCGATCCGAATAA 50
BSNT_01131___ 51 AGATTTGCCTGACGAACAGCTGGAGATTCTTTGCGAATCAGGAACGGATG 100
||||.|..|.||.||.|||||.||....||.||||||||.|||||.||.|
BL00587___pcr 51 AGATATTACGGATGATCAGCTTGAACAGCTGTGCGAATCCGGAACAGACG 100
BSNT_01131___ 101 CGGTCATTATCGGAGGCAGTGATGGTGTGACAGAGGATAATGTCCTGCGG 150
||||..|.|||||.||.||.||...|||.|||||.|||.|.|||||.|||
BL00587___pcr 101 CGGTTTTGATCGGCGGAAGCGACCATGTCACAGAAGATGACGTCCTTCGG 150
BSNT_01131___ 151 ATGATGTCTAAGGTAAGACGGTTTTTGGTGCCGTGTGTCCTTGAGGTATC 200
.|||||||.|||||..|.||.|||||.||||||||.||.|||||.|||||
BL00587___pcr 151 CTGATGTCAAAGGTGCGCCGCTTTTTAGTGCCGTGCGTTCTTGAAGTATC 200
BSNT_01131___ 201 AGCGATTGAAGCGATCGTTCCCGGCTTTGACTTATATTTTATTCCGAGTG 250
..||||.||.||||||||.||.||.||||||.|.|||||||||||||.||
BL00587___pcr 201 GACGATCGATGCGATCGTCCCGGGGTTTGACCTCTATTTTATTCCGACTG 250
BSNT_01131___ 251 TATTAAACAGCAAAAACGCGGATTGGATTGTCGGAATGCACCAGAAAGCC 300
|..|.|||||||...|..|.||.|||||||.|||..|.||..|.||.||.
BL00587___pcr 251 TGCTCAACAGCAGGGATACAGACTGGATTGCCGGCTTACATAAAAAGGCG 300
BSNT_01131___ 301 ATGAAGGAATACGGAGAACTGATGTCTATGGAAGAAATCGTGGCGGAGGG 350
|||||.||||||||.||.||||||||...||||||.||.||.|..||.||
BL00587___pcr 301 ATGAAAGAATACGGCGAGCTGATGTCGCCGGAAGAGATTGTTGTTGAAGG 350
BSNT_01131___ 351 CTACTGCATCGCAAATCCAGATTGCAAAGCCGCGGCACTGACTGAA-GCG 399
.|||||.||....||||..||.|||||.||.||.||..|||| ||| ||.
BL00587___pcr 351 GTACTGTATTTTGAATCAGGACTGCAAGGCTGCCGCTTTGAC-GAACGCA 399
BSNT_01131___ 400 GACGCCGATCTGAATATGGATGATATTGTCGCCTATGCGCGTGTGTCGGA 449
||..||||.||..|.||.||.||||||...||.||.||.|| ||.|
BL00587___pcr 400 GATACCGAGCTTGACATTGAGGATATTAAAGCGTACGCCCG-----CGTA 444
BSNT_01131___ 450 GCTG----------CTGCAACTGCCGATTTTTTATTTAGAATACAGCGGC 489
|||| |.|| ||.|||.|.||||||.|.||||||||||||
BL00587___pcr 445 GCTGAACATCTTTTCCGC--CTTCCGGTCTTTTATCTTGAATACAGCGGC 492
BSNT_01131___ 490 ATGCTTGGAGA--CATAGAAGCTGTCAAGAAAACGAAGGCTGTATT---G 534
|||||.||.|| ||.||| |.||.|||.|||||||.||.||..| |
BL00587___pcr 493 ATGCTGGGTGATTCAGAGA--CCGTTAAGGAAACGAAAGCCGTGCTTCAG 540
BSNT_01131___ 535 GAAACGTCAACCTTGTTTTATGGGGGCGGCATCAAGGATGCGGAAACGGC 584
|||||| ||..|||||||.||.|||||||||||.||||||||.|||||
BL00587___pcr 541 GAAACG---ACGCTGTTTTACGGCGGCGGCATCAAAGATGCGGAGACGGC 587
BSNT_01131___ 585 ---CAAGCAGTACGCAGAGCATGCGGACGTGATCGTTGTAGGCAATGCTG 631
.||...| ||.||.||.||.||.||||||||.||.||.||.||..
BL00587___pcr 588 GGTTAAAATG---GCTGAACACGCCGATGTGATCGTAGTCGGAAACGCGA 634
BSNT_01131___ 632 TGTATGAAGATTTTGA--CAGGGCTTTGAAAACAGTAGCGGCTGTGAAAG 679
|.|||||..|.||.|| .||.|| |||||||.|||..|||.||.||||
BL00587___pcr 635 TTTATGAGAACTTCGAAGAAGCGC--TGAAAACGGTACAGGCCGTAAAAG 682
BSNT_01131___ 680 G-CGAGTAG 687
| .||
BL00587___pcr 683 GATGA---- 687
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