Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02782 and BL00586
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence pep-align/BSNT_02782___ymaC.1.5803.seq
# -bsequence pep-align/BL00586___ymaC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02782___ymaC-BL00586___ymaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02782___ymaC-BL00586___ymaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02782___ymaC
# 2: BL00586___ymaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity: 130/239 (54.4%)
# Similarity: 161/239 (67.4%)
# Gaps: 7/239 ( 2.9%)
# Score: 628.5
#
#
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BSNT_02782___ 1 MRRFLLNVILVLAIVLFLRYVHYS----LEPEPSNQPDTYSNFSSLAENE 46
|::.:| :.||:|.|:......:| .|.......|.|.||..|.|||
BL00586___yma 1 MKKKVL-IYLVIAAVMINGVYRWSEKTTRESYQIQAGDKYKNFKELQENE 49
BSNT_02782___ 47 SPADYDISYNEKKGSKVLIMSPHGGRIEGGVSELVRYFNNEYSTYLFEGL 96
. :.|||.|:||.||..||.||||||||||||||||.||::||||||||.
BL00586___yma 50 K-SGYDIDYHEKAGSDCLIFSPHGGRIEGGVSELVRAFNDDYSTYLFEGK 98
BSNT_02782___ 97 KSHDNQTLHITSTNFDEPLAKKKIKEHQYVVAFHGYKGENKNTLVGGTDR 146
|..:|..|||||||||||||.:|||||:|.:|||||.|:..:||||||||
BL00586___yma 99 KDENNSDLHITSTNFDEPLALQKIKEHRYTIAFHGYSGDRPHTLVGGTDR 148
BSNT_02782___ 147 KRAKMIVRALERRGFSAELASSKSGLAGLNAENINNQGETGLSIQLEISR 196
|.||.||::|::..|||||.......||...|||||:.:||:|:|||||.
BL00586___yma 149 KLAKAIVKSLKKSDFSAELVKVDGKFAGTAEENINNESQTGMSVQLEIST 198
BSNT_02782___ 197 EQREAFFDDFYYKNRKYTKNSEFYAYVSAIKGVLEKEYL 235
.||:.||:||.||.|:.||...|..||.|::.||:...
BL00586___yma 199 AQRKEFFEDFSYKEREETKTRTFRKYVKAVRKVLQDRC- 236
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