Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03149 and BL00582

See DNA alignment / Visit BSNT_03149 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:49
# Commandline: needle
#    -asequence pep-align/BSNT_03149___sodF.1.5803.seq
#    -bsequence pep-align/BL00582___sodF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03149___sodF-BL00582___sodF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03149___sodF-BL00582___sodF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03149___sodF
# 2: BL00582___sodF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     188/284 (66.2%)
# Similarity:   231/284 (81.3%)
# Gaps:           9/284 ( 3.2%)
# Score: 1052.0
# 
#
#=======================================

BSNT_03149___      1 MKRESYQTEMFNWCEALKDQIQKRGQLDQFEDQIDKMIEALEDDQTTEED     50
                     |.|::|:.::.:|.:.||||::....|   |..::|:.::|:|.:.||::
BL00582___sod      1 MNRDAYKEKISSWAKDLKDQMKDDPSL---ESHLEKLFQSLDDPRATEQE     47

BSNT_03149___     51 WYKQAAALYRDITESDDTSERR---AYVPIGKHVLPKLPYKYSALEPYIS     97
                     ||:||.|:|:.|:.||.:...|   ..||||.|.||.|||.|||||||||
BL00582___sod     48 WYEQAEAVYQAISRSDASQAGRQPFRTVPIGGHRLPSLPYSYSALEPYIS     97

BSNT_03149___     98 RDIMVLHHTKHHQSYVDGLNKAESELKKARATKNYDLITHWERELAFHGA    147
                     ::||.|||||||||||||||:||.||:|||.||.:||:.|||||||||||
BL00582___sod     98 KEIMFLHHTKHHQSYVDGLNRAEKELQKARQTKQFDLVNHWERELAFHGA    147

BSNT_03149___    148 GHYLHSIFWFSMHPNGKRRPTGALFQMIDLSFGSYSAFKEHFTQAAKKVE    197
                     |||||:|||::|||.|||||||.|.:||:.||||||||||||::||||||
BL00582___sod    148 GHYLHTIFWYAMHPKGKRRPTGELLEMINRSFGSYSAFKEHFSEAAKKVE    197

BSNT_03149___    198 GVGWAILVWAPRSGRLEILTAEKHQ---QWDVIPLLPLDVWEHAYYLQYK    244
                     |||||||||||||.|||||.|||||   ||||||||||||||||||||||
BL00582___sod    198 GVGWAILVWAPRSHRLEILIAEKHQLMSQWDVIPLLPLDVWEHAYYLQYK    247

BSNT_03149___    245 NDRASYVDHWWNVVDWREAEKRFEQAKEVVWKLY    278
                     |::|.|||:|||||||||.|:||..||.|:|:.:
BL00582___sod    248 NEKAKYVDNWWNVVDWREPERRFASAKRVLWEPF    281


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