Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02374 and BL00560

See DNA alignment / Visit BSNT_02374 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:55
# Commandline: needle
#    -asequence pep-align/BSNT_02374___ykuV.1.5803.seq
#    -bsequence pep-align/BL00560___ykuV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02374___ykuV-BL00560___ykuV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02374___ykuV-BL00560___ykuV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02374___ykuV
# 2: BL00560___ykuV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:     138/152 (90.8%)
# Similarity:   142/152 (93.4%)
# Gaps:           4/152 ( 2.6%)
# Score: 740.0
# 
#
#=======================================

BSNT_02374___      1 MKLRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQ     50
                     ||||||||||||.|.|||||||:|||||||||||||||||||||||||||
BL00560___yku      1 MKLRQPMPELTGAKEWLNGEVTKEQLIGEKPTLIHFWSISCHLCKEAMPQ     50

BSNT_02374___     51 VNEFRDKYQDQLNVVAVHMPRSEDDLDLGKIKETAAEHDITQPIFVDSDH    100
                     ||||||:|.|:|||||||||||||||||.||||.||||||||||||||||
BL00560___yku     51 VNEFRDRYSDKLNVVAVHMPRSEDDLDLNKIKEVAAEHDITQPIFVDSDH    100

BSNT_02374___    101 ALTDSFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAETE--    148
                     .|||:|||||||||||||||||||||||||||||||||||||||||||  
BL00560___yku    101 KLTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLAETEQS    150

BSNT_02374___    148 --    148
                       
BL00560___yku    151 AE    152


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