Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02376 and BL00559
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:55
# Commandline: needle
# -asequence pep-align/BSNT_02376___rok.1.5803.seq
# -bsequence pep-align/BL00559___rok.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02376___rok-BL00559___rok.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02376___rok-BL00559___rok.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02376___rok
# 2: BL00559___rok
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 197
# Identity: 164/197 (83.2%)
# Similarity: 174/197 (88.3%)
# Gaps: 7/197 ( 3.6%)
# Score: 775.0
#
#
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BSNT_02376___ 1 MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIK 50
|||||||||||||||||||||||||||||||.||||||||||..|.::.|
BL00559___rok 1 MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTK 50
BSNT_02376___ 51 KDFRSEKKPDSLPVLAELAAQEIRSYQPQSQQQ---SVQPQLQS---ISS 94
||||.|:|.:||||||||||||::|||.|.||| |.:.|.|: .||
BL00559___rok 51 KDFRPERKTESLPVLAELAAQEMKSYQQQQQQQPQASQKNQQQTSPQTSS 100
BSNT_02376___ 95 LPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEI 144
||||||||||||||||||||||||||||||||||||||||||||||||||
BL00559___rok 101 LPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEI 150
BSNT_02376___ 145 EKESGLEIPNMTTFMQSLIKMYPEVKKPYRGQYILEGEIESAESANE 191
||||||||||||||||||||||||||||||||||||||| |.|:..:
BL00559___rok 151 EKESGLEIPNMTTFMQSLIKMYPEVKKPYRGQYILEGEI-STETEQQ 196
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